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Mouse element [ mm625 ]


Position: chr13:48,811,819-48,813,379 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Barx1 - Phf2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACtTGTCAGTCCCTTCCATCTACagccactaacaaatctgcccccacagcaagtgtctg
taccaggtcttgcttctagcgccagcaccaggccctggagagtctgcccacacaggccaa
caactcttcccagctacctgatcctgctctcgcatggactctctgccgagcctggaatcc
atacccttgcctcacattctcatgtggccagttcctattgctcttctccaacattgctcc
taagacactgctgctatgcagcccaccatgatttctcccatccctcctgaacctggtact
tcctctcttccccgtatctgcctttgctcattctccagtgttttactccaggctgggcag
agtaaataccaactagcttggggcagaaggaaagagtcaggattgggtacctacttggcc
tgtgtctgagaactgaagggtggtatgtagggaggcagagaggcagtcggaatggaccag
gagagcaacctcagagacagaaactgtaacaaaggagaagaaaaacaggtccagagagta
aaagagagagagagagagagagagagagagagagagagagagagagaaacaaaggagcca
gggcaaggaggggggggggagaaaagagagagcaggcccgtgagggggaggggcagcgtg
gtccgggttggggggaccctgaccccagcacgggggcccagccggctcaccgccccactg
agctcaggtttcagggcttggagagcccagattcggtaacaaatgcatgtgtaacgtatt
atgaagaaagccttaaaaagccctctttatcgctgtttacgttatgtgattgaggggaga
atttgccaagaccaaaggttactgctggtgtttctgtgacgaatattacctcaaactaag
gcaattagcttcaaggaagcgtgcgctgcctccggagggttctccagggcgaaaggcctg
atggattcgagggtaccaaggtcttcacggggagcgcggccttctgggtcgcacaccggc
cttctgtgtgtgtgtgaggtctaacacccagcctggtgggcctcagtttccctttctgtg
ggctggggagggggtaggctgatgcagacattccagggctcccgagggtggtcacatgct
ccgttggcttggctttctggggctgttttcgctcacgacttagctcatcacggttttttt
ttctcccctttgagacgattatggaaattgcctgagcagtaattagtgagttgtaattag
taactgttccttttctaagaaggaccgaggtgagaaacccaccaaagggcccctctcctt
agtttcctaagcttggaaggaacaccccgtgcatctgacttgacttagtgtgcctcagtt
tccccatctgaatgcaaagtgatgacagtactttcatcatgaggtgggcaaccaccgttc
ctccaacccccaatccccaacccccagcccccaggctgcttcattaatagctcagccaac
caggcaggttctcagagtttgaaagcctgaggcagagatccAAGAGGGAGCAGAAAGAGT
C
Primer
(+)caccTGTCAGTCCCTTCCATCTAC
(+)GACTCTTTCTGCTCCCTCTT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.