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Human element [ hs617 ]


Position: chr2:146,002,552-146,003,648 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TEX41 - PABPC1P2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACGAAGGCTATTTCTGTCAGCttctgtgattgactatgctgcttgtttaagttgttctt
tcccagaaggctccttgaggattactttgtggtccttattgacacctttaaactttagat
agccattatacttacactttttttatcctgtcataatattttccatcagaattatattga
tttccttttgtgaaaaatataataatcctcatagtgactgaatttttctatttttgccag
aaagaaaactattaaaatgcttgcacgtctccctcaaactgatactatgcatttaaaata
cttttgtaacaataaataccacacaggcatatgtatccagtaaagggtttccatttttat
gacacttgcttctcaagaacagacatattctttaaaggaaaataaaaagttgccagctct
gaattgattgacatttgtttacttaactctctccttttgaaagcctgcacacctatttca
accttgaacagtttccaactgtggtatactggaacattttttcatttattaagttcagtg
ttgccaacccaaacaaagtataatcagcgatgatccgagcagaccaagctgtctagcacc
atacaatgtatctgcatactaatttccaaattccctcacatttccagagaactaatggga
tcattttcattctgttacagcaactcaacagttactgaatcaccatctgtgttttcgtta
acctgaatcagatatgaattctgttattgcaaggtagagcagcttgtttaatgattctta
atcttttctttaattaaatcatgcagccaacctgaaaaatctatcttaatgcaaattagg
agcttttttggcattcgcttacagtaatgcactaataaggttaatttatgaaggttctct
tccagtctgtacagatgatatttgttcactgcatatttttagcatattgtccctttttgt
aatattttaagtaataaaaacatagttatttttcacttacacaaatgagagatactgtaa
gcagcactctctgttaaccaaaactaagtacaaaaaatataaagaattctaagtaAGAGG
GGAATTCATTTCACTGA
Primer
(+)CACGAAGGCTATTTCTGTCAGC
(+)TCAGTGAAATGAATTCCCCTCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.