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Human element [ hs600 ]


Position: chr9:127,123,220-127,124,245 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100129034 - NR5A1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGAGGGCTCCTAAAAACACAActtatctctaagcagcaactgcctataccaaaccccag
gccaggacaaggagggccaaagaaacctgctgacaaatcttcacacagtgccacagagaa
gttcctataataattaatccaagcaaaaagcatactccctaaagttcagaaaatataaaa
ggaacacttcttgctttatggctacaaagaccaaactaactgggaatatcagtcccccgg
gccacccctgcttcttaaatgagattacaataagagtgatgtactgtactacaagtcagc
tgtgacaagcagcactttatagagctatctgtttgtctccatcaccgcatcgcacaatgt
gtccctggactccaatgtgcagttccatttaccgctacatgacaaatgggcagcacttgt
aaaaggcacaaagaggtccacgtcggccacgtaatggtcaccacagctgtacccgagtgc
ttgaggggacaaaacagacccccaagttcattaaactgaccagtaatggatctttcaaaa
agtgccttaggaatcatacagaaaaggctgaaataaataactcagcatggaaggcaaatc
tgaaatggtgtttgataaattatttataacatgggcgattgtctgcatttaatattggag
ctactagtagcatctttaaaagatgatttatgtgttgtaatgctattaaactttatattg
gcccactgctagctataaagtctgctgagatttagagaatgagttttaaactgtcactgc
aacatcataggagatggagactgtattaaatctttactttaaacctgttatctagagagt
tgcattttgtagacactcacaaactgatagattacctcggcatccactatagtgcaggtc
caaaatagtactgccaagaaactttttccgcattattcttgtctacagctacaatcgaat
ttctcttctcacttaagtgatttttagattgggaatgtcaccagAGAAAAATGTAGCTGT
GCCAGC
Primer
(+)CAGAGGGCTCCTAAAAACACAA
(+)GCTGGCACAGCTACATTTTTCT


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