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Human element [ hs596 ]


Position: chr5:170,749,163-170,750,485 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TLX3 - MIR3912

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GACAAAATTGAACCTGCCCTTTatgtattttaaaaacaatttgtcaatggcaacaattta
caaaaatatattcctgttgcagtatctcccaatagctgggatttatggcttcatctcctg
gatctgaaagtataccggcatgctctagcaaatgggaaaatgtatgaacaatttgttggc
ttttttttttaatcaagttttcccaaatatgtaaactctgagagtgccttattcttttta
aatgatcattcatttgtctccagactctatcttttggcacaatttattattctctatttc
aaaaaacttaaatgcattttgcatattagcacgtaactcttgttcctgtctcctcagttg
tggaaagggctggattgcttttataaagaaaaaaatggctaataaaatcagcctcagcac
cattgctctgcaattcttatgaacagtaaagtggtacttaccgtcattgatgttaaaagc
tatttctaaattatggtgccatttattatctctagtgtccaaagtaagtttaaatgaagc
ttataattcatgttttaccaaatttccttttccccccgaggatacctctgattaacttac
gcacattaaagcgctctttaaattcttcttttattgccattatgctctgaaaatctcagc
gattctcaaaaatgggtaataaacttgagataaaatgctgcagttttagatcaatgctga
catatcactgtggtgatttctacagagctaaagtgataatgcttcatatttacggaatat
atactaggttattactacagtattaccattttgttctaagatgaaatgagtaatttacca
atttattaaacagttacatttaagtattgcttaggacattaccaccccaatctgtttact
tagcttgaagagttaccattaagataccctgtttatttaggtaaaatttgtaatcatcaa
gccttccattaaccaacttatttttctgcaaggctaattgtctggaaatgactttcttct
tatttactgtgctatattctgcttagctggctaaaaacgccaccccagcaaacagtgcta
gggaaattaataatacatacagagaacagttttaattagtataataccaaatgttaataa
aagatttatgacaccgttagaaagttctaatggaagagatctttacagcttcaggctcaa
tttgtcagcacagccacggctgcctttcatgggaggccagatttggctgattttgagagg
ctgctggggtgcagaggccagaccggggacctctacctttaAAAGAGGTTCGCTTGGAGC
TAC
Primer
(+)GACAAAATTGAACCTGCCCTTT
(+)GTAGCTCCAAGCGAACCTCTTT


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