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Human element [ hs584 ]


Position: chr2:105,254,095-105,256,398 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01103 - LINC01114

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCAACTCGAGACTCCAGAGAGAtttcaagagaccttgagtctctttccttaccaaatgca
ggctgtagtggaaaaggagtatttaccctatttgctccatcacatgttaaatattgaaga
aaaaaacttgtaaaacataatacagtcacacatgtagaacaatcaaggtgcccattccct
ctaaaacaaccaaggtgtccattccctctactgcctaaaatttacaagatttaaaaaaaa
acaaatctcttttgaagagttaaaaacagcacataatctgcctgcagacataaaatattt
ttctataaacttattagctcttctagagacaggctggccttcatgatgaataaagaaaac
tagttatcaaaatagtttcagcatgtttcaaaagaggaaaaagacagacgacacttcaaa
atctgtttgagaaaacaaaagttgtatggcatccaacaactccagggctgatgcgatgag
ctccaagcttctcaccaaacatgtgggcccctgcagaaatatgccaaaacaacacagttt
gggctcattgtatcctaattaatactataatgagtttccttagatagccaaattcttaat
cagtcctatcaaaactatgtctgcccagaaaaagattcatgttaattctgcttaatgcct
aacagtggttaagcaccattaatactccataatttcattgtatgttattgtaatcatatc
agcgtatatctcagtggctacgcaaagctcaataggctgccttgaattatcagtcacgtg
actctgcttcactaagagactatcttccatcacagccagacctcctttgccctccccgca
gtcagtagcctaagcaggtattaataaaggtctccttttttaaattgcacagctctaaat
ggtctttaagggacccagcagtaatctcaagatccctatattttagcaggaaggcaggac
agaggaattaataagagccctttctgtgtaaactgctccctgctctaaggctataccgtg
atgtcagggcgctaagagaattttaaatgcacaggatggattgtttgtgttgcaaaagcg
aaacagggggcaaaggctaagagacttgagaaaattgaaagactgccaggatgctgggat
gcaaatagcaacaaaacagggataaatgctcctgctcacatatgcaggagtcctgcagaa
ggggaaaaaaaaaggttattaattttcaccaggctgtatcttacagctggtggctcagca
tcagtttttggtgtaatgaaaatggtctgagcagaagataaatggttcataaagtggacc
atttagatgcaatcgaggctcaatctgcccagtgactaatcacgtccccccagtaaagct
gaattccactaacagactttttttttttttccggctgtaccagtgaattgtagccgggtc
taagttcaaggcaggcagagaattatcttgatttattagtgcactccctagctgtgccac
tcgctcggctgtgcctttgtgggcttctgccctgttgctgtcggagtgtaatttttactg
ttcccccgtgactagtacacagcatcattttcagctgctagaaaaatgggctgcttttcc
acctgtaatttttcttcttttgctgctgaaggtatataatatatctctaaagtgcgtaat
aagtttctgaaaaacgtgtttttaaaagaaattgattccagtagtttgtaagcctgagca
aggccacataaggaaatgcaccagattgcaaaggtatgcatgcttggcgaggcagccatt
ttttcccttccatttagtgaattccgacttctagtccagagtgtaatttcagacattttt
ctatacagtagtgcttctcataatgaactctgatcaaataaaaatgttgtttatattgag
actttacaagtcctgattatgtataaaatagagtagaatccctcataatgacatttaatt
gtgagaaagaaaagattccaatagaagagcattcagctgcatttgttccatgttcctttg
cataatgccgtttatagatcgttcaattatgacattattatgagctgcataagagtaact
cactggttccccatatttttagacctatggaaaataaacttgggtgcgattttcgctatt
ttgactgcgacttagtcacaaaaggcccttcatttttagaagaactgactgcacccattt
ggctaacgaactctgatgcttcacctttgatcttgcaagcatcttcagagaagaactcac
acTGTTGAGGACACTCGGAAAAGT
Primer
(+)CCAACTCGAGACTCCAGAGAGA
(+)ACTTTTCCGAGTGTCCTCAACA


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