Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm582 ]


Position: chr8:26,575,814-26,577,086 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 5430421F17Rik - Fgfr1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gACCCTGTGGGGAAAGAACTCatgaagagctaagaagtttcttagaaacaaaagcctctt
tggctggccagggactgttggattgcttgctgagctcccaaaccagccagtggggggaac
aaggtagggaaacggttgagccataaacacaagacaaagaacaggcagttccaaggagcc
aagaatgcaaatcatttgcaggcctccgagagactctcaaccaaggaccccagtgggagg
tgggattgcctaccgctgctgcagaggccctctgtgcacatcaactgcagttgagtgtga
gcctgcctatgagggtccctgctgagtcaccctctgtgtgtactgatggctcagcggtga
gtcaccgagtgtgtgtcagagtctgctggtgtatgtgtatgctccagcgcaaaagtatct
gaggtttgcccgtgggagagtgatggtgtactgtgaatgagaatcagggagccaggcaga
gtggagcgcaggggggaggctgtgtttaaagggcaccacacttcattcacgctgtatatc
acacaccacatttctgaacacagtccagcgggagccatctgtcccttcttcctgcggaac
acttcccctcccccaccccctgtggagcagcagcgcggaattcttcaggcagcgggagga
gaggacttctgaaatccgtcaacccggacccccttgcattttgcagaggggaccatagcc
aaacaccaccgctgcggcctaggacagcgaggtgcaactgaggctggcacggcatcctcg
atcggtgtctgagtatacagtgggtcctttctcctttcccagaaggaatgagatgacgtt
gcatctttcaactaaaatgcactcagagcagccccgtgcaaaaggggcttgtcttaatgg
ctggaatggttaaataacctagaaggcagcaagcactgtaccagacagccctagacctag
attcacttgactccttgactcctttccctcctccctgccccacctcccccctccccttct
tgccccacccagatcagaagtctctccctgcaccagccaggccttttggcagccctgacc
tacatgattcagaatttgcttctgggacaccacagaagtgtcaccttcacgggattgctg
atgttttccttcccttagccatcagcttggtggccacgttgtcctcacggctcagtttcc
acgaaaaggaatggataaaatagggggttgactttagcagttcaagaaaaatGGCTAAGT
GAGGGTGAAGAGC
Primer
(+)cACCCTGTGGGGAAAGAACTC
(+)GCTCTTCACCCTCACTTAGCC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.