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Mouse element [ mm578 ]


Position: chr11:114,690,742-114,692,195 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gpr142 - Gprc5c

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCATGAGCTTCCAGCCTTCTgagattccagcgctctaaagctgtttcttattcttctaag
cctgcttggctcaggatttatcaaactgcttttacagcagattccccaggtcctggagat
gagagggtgccagagaacagggatgagggcctgggtgggaggaggagccatagggctcaa
gtgggactccttgttggggaggggcaatggctctgctctccccgctcctggcctcgcagg
tatgagcatatgctgcttcctggcaaactggccagaccagccagccggccgtccttgtgg
tgccagagagagcgacggggcagaacagagtactcagctcagaacgcattttaaaaatac
atatattaataatcaatggctagggcagtaactcacgacaggaagggggcagggcgccat
gacatcctccccaggagccagctgcagccggggttctggggacgttgatggctcagcagg
agctgtggccagcccgcgccagcagctttctgcacccaaaggcactgccagagctggcac
acttcactgggcagggaggagtggggcctcgtgcctaagcacttatttatttggtgactg
aagccagaagcaggtaagctggatgctcagattatccggtgaagagcaggccctcccctt
cctcagaacccctgccagctctggaaagcggcaggagtcacaacccacagagaacccagg
acaccccggaagcaagaaaagggaccaagtaaggtgaacgctgtggctcctaagcaggca
accctggcccgccgtcattgaccaataacaggagagcggcctcctccgtagaccttcctc
ttcctggagtgggaagagaggactgggatggggggaggggagtgccagacagccacttca
accaggtcacacaaaatacagaggagatcgggttacagccctgctcagtctcaggcaggg
caattcaacttctgtggggaggctctgagctccgtttggggcagcggtgggacgtgggga
attcctgtgtgatggttgtgaacaagtctcctcctgtcttcatgggcagtgggactgggg
aaaacagttgctttgtactagttgctgcccggaggacaagagggcacttcggctgcccgg
gtacctagtggcaggctcagggcaggggtgaagtcagggacaccttggcccctagctggg
ctctagtcctgtataaatcctgacaccaaaacatccttccctggcagaccgactgtaaac
aggaatctcttgcattcgtctttctgcccaacagaagtccacgctggaaccatctgacac
agagggcagcccgaaagcctggcaaatgccctaattcagggtggtcaaactttctgtaaa
gggtcggatagcaaatcacgtgatctccatcacggctgtggcatgtatccTGAAAGCAGA
GGGAGTCCATaGTc
Primer
(+)TCATGAGCTTCCAGCCTTCT
(+)caccATGGACTCCCTCTGCTTTCA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.