Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm568 ]


Position: chr11:94,742,242-94,745,125 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm11544 - Col1a1

Timepoints:
e11.5

Expression Pattern
branchial arch (3 out of 5 embryos) 
forebrain (4 out of 5 embryos) 
hindbrain (rhombencephalon) (5 out of 5 embryos) 
neural tube (3 out of 5 embryos) 

Embryo 1




Embryo 2




Embryo 3




Embryo 4




Embryo 5


Fasta sequence
aACCTGTCACACCACCCCTTAgacctcggcctccattaaatggtgtgaagacggaatgag
tcatacaaaggaccagagagacgccaggctgaatgcctgggagttagatcgccctcccaa
ggctcttccaggggatacaaaggcagtggggagctggaggccagtcagcttccaggaaag
aggctggaagctgggggtccaagacctcagcaactgccccctccctcccctgctagagga
aagggtgagctcacaagcgggcccaggcacagccagcgagtaggagacataattaaaatg
ccagaggttaggaggtgaagttacaacggaaagaatgaagggccagcatgctgcggcggc
ggcggcaggggccagcatgcggcggcggcggcagcttctcccacccgctccctccctctg
ccaagctcacattcgatttttatttcgggagccgccagcacagcacttgggagggagcaa
agaaaccactcaatgctctcaccctgccacgtctggagctggggctaggcaggggaagag
cttcgggaaggaccagcaggtccccaccccaagtcttagccaacctcaggaatggggcgc
caggggaatgtggcacctgggcaaaaagtggggcttagaaagcaagaatatccagaccta
ggagaacgaaggctgatccctgccagttctcttgaacctttcctgggtcacttcagctct
tggggatgaactcagaatcctcctgcaggggaaacattcagctcgttgggtccttgcttt
gacttggccacgtgtatgcatggaaggctcctaagcctggtcttggttcttgtggctccc
agtgtgacccgggaaagttactgctcttctctggaccttagtctcctctgccataggaag
agttagtaagatgaacagttttgaacagagctctgcaaaggtctggtcttgccttccagg
ccatcttcttctgagcacattttgtgtctactttctagggagataggaagatgagggcta
aggctgagcggcccttgaagagcacagagcccttcctgcagacaggagctgggggccagc
tctgtgttctttgctctcagttttctcctcaacccataatgcagtccagatgctgcctca
tcagaaagccgaagcagcagattccagggaaagcggttgggctcctctctgcagcaggct
ggggagggggctggggcaggccacggagaaaatggagcatgtgggaggggtgctgcctct
ccccccccccccaggagggcatatggaagagatctctgagacacctcactaccaaataag
gggctgaggacagcacagacatagaaaggagtggccaggctaagaagagtgtgtctgctg
agctccttggaggtgccctccctgactgctccgccagagccttgttggtagggggaaggg
tcccaagcatccgttttgggaaacagtcccggtatctgggttcaaactcttgcttcgcct
gagggagacttaatagcagttgatggggcatagttgatgggacttcgagaacctcaatca
cccaccccatccataaaatgggttgcttaatgctactcttgggatggctgtgactgtgac
acacagcagcctcactgttaggcaggattcctgcaataaggagaaaacttcattgtctac
ccctggtttcccccccccccccccccccggtacagtttctctgaggactcctgggagaag
tcaagcctcctttgagagatcgtcctccctcccgattgagtataaagagggagggtgctc
tggcaaaggctgaccctggtgcctccctcctccctggctggccctccccctcaggactcc
tggctaggctcaatccggggccaaagagccacgttgaagaagcagagggtgcagggcagg
ggcttcaccgggaggggggaagtctctccccagccaggccccgcccgctctcgtcttccc
agccaggacagcctccaagccacgctatgctctcctctgcctcagatgcacggaggggag
cgcctcgatttttttttccaccagtagagccaaaagtaaaatgagaaccaaatccaccct
gaagctgctgggccccctacctatccctgtggtgaatggagggagggtgagggactgcag
tcctgtccccaccccattcgatgccaggaccccccaccccccaggggcagatggctcagg
caagagggacctcgcaagagggacctcggctgcctcaccctcactgtggcgtggaaattg
ggggcggctgacgtatgactccccacccctggtccccaggaagagaaagccccaccccac
tgccccactctgtctccaggctggggcttcactgtctgagtcccgactgaagggatgaga
tctctgaggtctcttcctctaactggcccctgtccattcctgtacctcctttttacagag
tccttttccacacaaagtcctttcccttgaccagccctgccttccccgccttgcgcgctt
gctttcttggttcatctcattgttgggcccccaggcagagaggccttgtttctagccatt
ctcgcaaacaaacgcctggggtgttggggtggtgagcagcagcctcccttccggaatttt
gccacttgatccacctgagcatattccttcgctagtggctagtgagtgttcctggcacaa
gacccgctctcggccagactcaggactccatctcctgctcctaacacttgccacaccctg
gtctacatacaccctagtctccctaagtctcacatctcagttttgacgaaccatcatcct
atcacgtactgaaatctcttcctccgtcctaccttagaaccctcAGCATCAGCGTTCCTC
AACT
Primer
(+)cACCTGTCACACCACCCCTTA
(+)AGTTGAGGAACGCTGATGCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.