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Human element [ hs561 ]


Position: chr12:16,869,033-16,871,415 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LMO3 - SKP1P2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGCATGAAATCTTGCCAATGttttatcatttgtgatatcatttatttagaatgcaggctg
aatgttttctggtgtcatctccatttctggacaatgcagacctgaaaaccaatatcatat
tatcaacatatcttaaatgataaaacaaagcatatgtatgaaggagttcatttactttac
ccttttttattttcaggaagtcaagcaacttttaaaaagatacaataaatgtgtttttgg
cacatcgaataattttatacacacatctaaaataagcaggttctaagtactgagctgccc
atagttaaaatagttattaaagtcccaacagcattaaaatttaagccttctttattactt
ttaaatctcttgtatttcactatggatggcagctgttcaaagatatgcacctgttaacct
taaaattgctgaaacaatttttgtccttatagatttgtcacaaggagcttgtaggctata
tctgcaatagcttatgtgaaaatgttccctctgcactgcatctaggctaaatataatata
tccagaagatacacgtattaaatattaaaggaatgtttaatcaatattagtatgtttaat
atttttactcattggtccttactttccttattatttgatgacagaaattcctttaaactg
gcaagccttctaacagaaatttctttctttcctataaaaccactctggaaatagatatgt
ttgggtgaacaaaaatgctgattggaagagaaagggttactctaactctcaggacatttt
gataagatattttaataccaatttattaaagtaccagcatactagtgatattgctgcaat
tcattgtacctagaaaactcagcattttatggagttctaaggcatcccaataaagactcg
ctccactctaataaagcaatactccgggcaaatttacggttgagttctattctaataaat
ctccaattgtaaactaatgaaaagaccccactatacctccctcatccactcacacaaaag
gaagcaatttgaaaacgtttgacaaagtaacactgcacatcatcagcactgaagaacctc
atttcccgtccatggagatattgcattatcattcatattaaagaataacccaatggcact
tattttcaggaaactaaattaccacacaatcaataatgcattctagtttaatctgaaatt
tcagcatgtatgatattctgctttcagttaatatcttgctgtacagcaagctttggtatt
gcaatatttctataagagaattacctgactaaataatcaaatgctaaagtagctagctaa
gagatattaatctattctgtagatggcttaatgtaaccaggacctggaaataaaaggcag
gtaagcaaatatttgaggagataaagggaaaattatcaagcattttaactatttcagaac
agaaaatgtcaataatgggatgttttatgcatttgcagtagttctgctttattgccgatt
tacatataaattgccttattttaggctcaggaagttttttacatatctgtttatgataca
catctctgctgagatgtcaaaaaggctgttgcatagttttaagttctttagacagaacaa
aattttagcaacatctttattaacccttggtgaaagttgaaatacaggttaactgtattt
ataccaaaattttagctaacaaaattgacaattttagcttacaaaaacattccaaatagg
aaacttttatgaaaaggtgaacacaactaaatattcattaactcttcttcttttggaaag
aggctaaagttagtgttttcataaaagactaagaaatgcaaatagatcacatttatgggc
ccccaaatccccttctataatcaatgtaaatgcagtgttttcaggtagcaaatctagcaa
ttccagaaatattcctctaaaataagtacttttgttatcatacccagtaacatattcaat
ccaaatattacattactttaatatataaaactcataaatgccaacagaatttgcatttga
atagcatgttaggaatttataaatccaacagcatatctaattggaaaatagataagatta
aaaaatgttgtaaaaagggaaaaacttattttgtgttcattgttgccctctagtctaggg
aaagccttttgaaattttatttctgtgaaaagtatatggtcaatgaagtcctcagttctg
aagcctcggacagatactccttcccgtgtggctacatgacttgattgagcagcactgaag
ttctgctgtgtagcaagaaacagtaatgttagaaacagggtcagccctttcataggtgga
atagatcaggcatgattctctggAGACCTGGAAAGCCCTCTTC
Primer
(+)TGCATGAAATCTTGCCAATG
(+)GAAGAGGGCTTTCCAGGTCT


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