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Human element [ hs555 ]


Position: chr14:29,997,171-29,998,891 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR548AI(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATTTGGTTCATGAAGCTTTGGAtgaacccattgaacactgatattttaggaaagtatttc
ttactgttgaaagtataattggccattcattacttagatggccagcttcacagtggtttg
cacccatttgtataacttaagtaaatgcataaatgcttcctttgaaatgacataaaacct
aaatcattccataaactaataaatgatagttgctcgctatcttgtacacagttagctttt
tattggttaaaaaaatgtaagtgaacatcacagatgcaaaatgtttgttgttaagaatgt
gtgtttacaggtgtggaataccctaaggatgggtagaactgataccctgctgcaggtgca
gactttaataaacaggaacttgtctttcctctaatcacttctctcctttatcatgctttt
ggattatctcaattcacattaagtatcacttgtgcataaagcatatacagtgtactatat
ttatttaggtatacatgtgactagatcttctatgaataaaacccaaaatgcattcacatg
agaaaatggagtggtttaatttaaatattttaggagtgctagaatactaataaacatctg
gaagaacagataaaactagataaatgtttagccttgttatgagtaacacactagcatacg
attaggtttataatggttgtaatttaacaaaactgttgtatgaaatattttgtttagcat
tcattaaaaactgttaatgcacttgtgtttttcatggactaaattttttgcagcagacgc
acgttattagtataatacaaatatgctaaaaagcaaacagtttggtgttaaaatgtttta
agtagaattgtgaaaagaaattttacatcaatctttattttttttcatttttacagggaa
aattttaccacaaattccatattttaatgatattataccaactctattttttaaactcat
tttgtcactgttttgtaacagaaacactgtaaatattatagatgtggtaaactattatac
ttgttttcttataaatgaaatgatctgtgccaacactgacaaaatgaattaatgtgttac
taaggcaacagccacattacatgctttctctttcacagtaggcagcagagcatatggttt
tctcttaatggaacgctagcttctcattaacataccagtagcagtgtcagaacttacaaa
ccagcataacagggagatggaaaaacttataaattagaccctttcagtactattgagaag
gaaatgactgatgttctaaggtacaatatttagctaatactgtgcccttttctgcacctt
ctttccacaaaaagaaacttttttcttataataaatataaatataaatattgaagtgcaa
gtaatttttaccctgcttctaagagtgattggcaccctgattttgataactcttcttaaa
aataatatttcattgcctttttgctcacagtatgtttcaaacagctgtattttcaccatt
ctgtttcaatacagagaagcagttgaaatacaaaactaattttcttatcttcctaaaaga
ggaaatccgtaaggtaaacacaaaacgaacatgggaaggaaaccctttattttctgaagg
ctaaggcctaccacgccaatagcagaagtggagccgccaagaggtcatgattggtagtga
agggaagagaggaattgtaTTTAATCCCTATTTCACCGCGT
Primer
(+)ATTTGGTTCATGAAGCTTTGGA
(+)ACGCGGTGAAATAGGGATTAAA


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