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Human element [ hs551 ]


Position: chr2:156,584,380-156,586,345 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: KCNJ3 - AC093375.1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aTGCAGCACAGATCTATTGTATGTTGaaagcaaaagttcagatagaattttttttgtagt
ttgatatgagtagataaatcaaacatcaaaagtctctttcctgaaccctcattgtacctg
taaaattaggtatatcaaaaggaaaatctgtgtaagagtatacatttaaagtatacttgc
aaataaatttgaaagattatttctttaagataaaatgttaaaagaataatatggtaaata
gatacattttagttgtgggtagaacactttaaaatataatatgttttgtaatcgacacta
aagtaattttgttagatattctgtgcagttcttacatcaaacattctcaaaagccctggg
atcattttatattcactggaagacagaaagaaatccaaaacctagttaaataaattgttc
atttattccttcccttttatgcaccaagatctacatgtggtcattaattataaagagact
attatagcaccatattttcattcaatacgatgtcctggtatatatcaaagaagtcccata
attaaaacagaagggccacaatgacaattaaaattacaatctatatggggaaagaaagta
cagttctgcaatttttcaccctgtcactgtcagctgcatggaatattctggtcacgtctc
ttgcaaagcagcctaaattcttcttcaccaatgcaacctcaaaagcattatcagcaccta
agcaaaagcctgtgcaagtataatttaatacgaagccacagtttgcaagtaatagcgtat
aaagtgatatttaagtggtgttttaagcacacttctgatggctacagcctcttttccctg
gtaaatgcgttttcctttgagtagtgattatgagtcctaggtgaagaggtcctgtgtgca
ggtctgtctgtaagccttacttccagctgccaatctttacttcacagtgaagaaaaagcc
acatagcaccttgttcttactcttgtatgctgtcatcccctgagcctgataacacaaaat
catttccacgtaacactttcctgcttctgcctcttaaaccttgagacctacacattgtgc
atgcacttgcacccttggcaaccggctcccaggaagccccttcttttgaaccatcagagt
cttctaacggactatttttaacacttatcttggtaaatatctgcattaatggagtacaaa
gctttttggtagcaatatgtatttgctacaatttattgtctataaaagtcacgaacagtg
aattattactctcaaaattgtgtttttctttataataactttaaactgagcgctcatata
tgaagcatgcaatggagattgagaaggttttgtataataaaactgtgacatggtcatttt
ttccagttttgcattacggagacacactcatgcatggtgctttttaaattcttattatgt
gtgaggtcagggggtcgaatgtcagaaagtactgttaatttcacggggttaggggaaagt
aaattcagagggaatacagatcacttagcacagaaaaccagctcctctgaagtttggttt
tacatttgttaaccatatccttcagctgacgaaccattgagaccacggtgacattctggt
cccagatataatggcttgacatgctgcagtgagagtgtgattccgtcgccctgctcccgt
gccagcctcagccttcctctgaatcaatgaagcactaaaactccacacaactggaactga
acaaagcatgttgccattttggctgtgatgtttaaattatagagaaagcagtcaggatgt
cttaaagttcaatctgacaagaaatgtaaaatatatttctgtcttcattctctgggaagg
tagcatctcatcctgcacagtatcactacccagaatccttttaaagtggtttgtaataga
acatcaaagacgaaatttttgcatTTCAGGGTTTTCTGCCTAATCA
Primer
(+)CTGCAGCACAGATCTATTGTATGTTG
(+)TGATTAGGCAGAAAACCCTGAA


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