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Human element [ hs549 ]


Position: chr2:156,658,670-156,660,246 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: KCNJ3 - AC093375.1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TAGCATGACACATCCAGGCATTtaaaaatatgtttagaaattttagtacaccttatattg
aggagttttgtttttatctttggtattgttagtgctgttctagagtaggttagtatattc
ttttattatcaaacataaaaacaaatgagaaaacacttttgtttcaaattctgatttttt
ttcttccacattctagtcgttactggtattagacacgtagacatgtagaaagataaggga
caagacacagataacgcaaataaaaattgaacaaaacacaggaagatgacatttacaatg
cagctgacaaagccagtcacttcactttaaataatgtggcaggctgcaaaactatagtaa
ttactagaatttcattttcattaactaataaaccaaggaaaacaatttaagtatctgaat
gtcatttttcaaatgaaaataaactgtaaacatttgaataacatcacagcagggataata
tacctaaggaaatctattgaaatatgttagtggattcatcctcttctatcacattaaaac
tgcaattgactgtaaacctcctaccactctccactgagactttaattgtaaagattcctg
ttacatatcatattagaatttagttaaaattgtagaacacattatttccaatcagacagc
caaccatcactcacaaagatttttaaaaaggtgattaataattcatctcagataaggaaa
agatctatatttataccatcttctcagccaccataaactacctgacaattgttcagtaat
gatgcccagtaaattctttaaaatggtaatttgtcattctgtcacttcatttgtgaccta
aaattcctcacttgaggcatcatcaaataaattaatcactttccaggatccatttctctg
ttctgcacgttattatgccggggctctcttgtgtttctcttcatttacatatatttaatg
gctgagccgtggttcacgatggcacataacgcacacatctcattacaggtgaaatattct
aactgccactatcactgggaaagaaaataactctcccaatttaattttcctgatgtaaga
aaaccatgattcttcactatgaaatgttgatgccatccatcagtcacaatcaataaaatc
atcatagaagtacgccttcttcagcatctttccttcatactggtattatttgaggaaggt
aattaaactcataatatgtaatgaatgtaaatgaagtaaaaatcctcatattagctctct
aactatgcttatattacagcgttgatttaaaatattttccccaacttataaatacataag
acccaaaaaaagagctatcagctgtaaagacaatattcatcaataaatagaactaatttt
taaaggagcattttaaatgtaaaagtaccaagtattaactatttatagatttttcactta
aaatgatacattctctttggatttgtatatttccaagctttctgaaaatgtagctagtac
tttggatgtacatgttatcatgtcacaaaattagtgatttttttcagtaacctggTCTAC
TTGATTCCCGCCATTTA
Primer
(+)TAGCATGACACATCCAGGCATT
(+)TAAATGGCGGGAATCAAGTAGA


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