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Human element [ hs544 ]


Position: chr2:146,412,340-146,413,619 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TEX41 - PABPC1P2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTCTTGGGCAATATGAAGAGGAtgggagacaagcaaattataatcctagtatgagaataa
actattttatctcattttaaaatatatacgactttcaaacagcttccaaattgggatact
gcatcattaagcatttgacatttgtccagttaaaactattgactcatgctttcatggctt
ccccctcaaattactacagtgccacagctgatctgacaatattttccatttcttataaat
agccacaagaaaagtattaattatccttgtacgatttaatgcaccaactgccttaacctt
tcaggttttcttaaacgccagcataacaaggcatatccatggcagcaaatgtgatttatg
acaggaatctttaatttctgtttttaaatatgttacccaccgatctgcatacatttaaat
tcgcctgcaacacttttctctgtcttgaggctgttgtttaatattcaaggatgatttttg
tccacatacattttggtctatgtcacctcagattaaattattactgtttgcagccttttc
ggagcaggcctcaggcccttatttacaagaatcaatgaaacagtaatgaaaatccatttt
tcatactatcagctctggcctgcttttatttagttagctgtgtctaagcaagcaattcat
tttgtgcaaatgtcatgtagagaaaaaaggatacgctgtgaaagggttaatcatgaaata
agacctaagctttcccccatagtaaaaagcatccgtaatgttgaaatttttttaaaaagc
ctttcttaatatatgcaaagtaatgtatattgacacataagcaaggcttttcatgatgaa
tattgaaatatatatgcaaagcacaggaaatgtgtaacatgttatagatctttcagtgta
catttagaggaaatgaaccatttatattctacaatttagtgaatacctactgtttattgg
tacagagcacataggagtatatttgtcttagtaatttatttaggtaaatatatttattct
tctaggggttcttgtgcttttcttggttctatagtactagacataaatatttaacaatgc
attgtctcaaatgttattcatgtaatttatcagagaaaacagtggagttgtaataacttt
taagcctgaaccttctcttaaacctgagattgatttaaaatgcaggaaactgaccgaggt
tttcttcatgctgctgctgaaaattatttactagttctaaccgagatgagctaaactaGT
CCAGCTACCAAACGAACAAG
Primer
(+)TTCTTGGGCAATATGAAGAGGA
(+)CTTGTTCGTTTGGTAGCTGGAC


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