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Human element [ hs537 ]


Position: chrX:124,653,246-124,654,824 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100129520 - LOC101928495

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAAAGGAGTGACCAAGGGTAGAttttttgactatgtggaaagtcaatggaataaataatt
tcaagtaatcagattctgttagtgcttctcaaatcaccctatctaccagtctgccccgac
tgcctggtctattaattatttgatgagtcagatcttttatctctcttgggaacatgtact
tccctatgctcagcaccttggcacctgggttctgtgagagtatttctgtcattgtaagaa
agtgccatgaattctctcaaactcttttgattcttttgctcacttacttaccaaaaaatg
tcttcccccagagtatgaaagggaatattgggcaccaagcctgtgactgcatgatttttc
ctcaaattggttttaggccactgaattaatgtagcaactgaagccagactctttctctag
agtcatcaacagttctaaaagggatcaatctatgcccagagcagagcaactgaacagttg
caagagaaaattcctacccaagagagtgatatagaatgtgtcattttttttggatgatct
tttatagggtgatcaagaggctttcatttagtgaatacatttgctcactcagttttggag
agtcgcccttcatttattctttccctttggaagtactttcgagtgcaaattactgctatc
agaagccttgaactgagaggctattattctccttgctcagattaaattaattttgaacag
tttaatgcagcatgtccaagctgcaagtccaagtggtgtcaaatctatttctctgctttt
tttaagctgcaccttcaagggcagtatgattcatggtgaatgtgttcttctaatgtcttg
ctaagtgttattattttctttcatttgcaagtcatgaggctacaaatgttaaccattctc
ctcctaacattgtataaagaatgcatgatttaagccaggctgattttccaaaagggtgct
cattacatttacttgctttacaaatgaaataaagaaaaatactctggatcaaagcaagaa
gtttaaaaagctaatgaaacattagaaagcgaactgctttgagaagcactacaacatcat
cactgttgtgttaaaaaggaattatctcgatctcggcttatgtaataaaataaaagggtt
ttaatgattggctatataattctgtttgtgtttttgcagacttgcaaaaaaaaaaaaaag
aatataaatctacttatcttcgttcttccagttcaggcaatctactgtctctccagtatt
cactttatctaatctgtccttgaaatgtactaatgaagttttctctgtgttattgtagag
caaacagtcaaaaggatgccaatcaattaatgacagagtagaagatgtactttaagcagt
tagaggtttcaaaaacctatcaacctgtgtctatataaactacttaaattgtacagtcca
ggacagtcttttctacagctctaatcaccagttctatagattaaacaaattaatgttttt
acaggtcttgtatggagattgatgaaaatactatatcgcagttttcctttggagtagCAA
AGAGCCACAGATCAAGGAC
Primer
(+)CAAAGGAGTGACCAAGGGTAGA
(+)GTCCTTGATCTGTGGCTCTTTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.