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Human element [ hs530 ]


Position: chr6:99,424,724-99,426,847 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FBXL4 - FAXC

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAAGGAGAGGAGAGCATGTGTGggaacacatcgccctaagtgtctcccaggcaagttgtc
atatgatgtttatcaagtgacaacctcgattacaaattctgtaagctcacatatctgcct
ggcatgcttctgtattatgaggtatacttgtaaatatcaaccaggctgaaatgaagcata
taaaacttaagtcacaggaaacaagaagggaaaagttttgagcatatgagaacaaggggt
tatgtaagggtgctgtggctttaactgtaagccctgaaaccctgagcgtgttgtgacact
gttgtgacatttaagaagagttacaccagacaatttagatttcactgtgacatatgctgt
ataaattctttaatgtttagcttatcttgcactaaacagcagaagaatacttagtaagtg
caagtaggtcaacatcactttaatttgcattatcagttcagaagaacattttacactata
tgtgttgtgataaaacactgtgtcatttctgtcacccaatgcagagtatttttaggtctt
tgcacattatgtgtagagatatttggtattgcctttaatgtaacttgccatctgtgttct
agtttctaagcattggcagaagcgagctaaaagcattggccaaacttcaaggggttaaga
tttttgctaacaaatatggactatttgatatgaaaaccatcactgtttgatatgtcaaat
aaaacatttgtcaatcaaaagtctttaagcactgggctatgtgacatttactcttttata
aaccaacaaagtccctggtggcatgccttttttcctctcatttaaatagtagtaggagaa
caaatcatacttcagggcaagttgataactgccagtcacgattcctgccttgtttactat
aatgaggagggtaataaatgcatctgaccatttcagctggcatttgcatagatgaatgat
ttgtccagtcagtcactctccagtgatttgggtctttttgtcagcacaaagagcattcaa
tctctctggaatttacagcagccaagctctcattagcaaacatcctttaccatgaatgat
tcaaataattaccactgaaataataaactgtttcacaaaaacattttatttgatggctcc
aaacatcaacttttctgaattgttgacattcaaataagccagagagcttcattgttaagg
aacaatggcactcttgttaaagggtgggcattgttttacctccaatagacctttaaactt
ggctggctatcaaatgcgtccctcaaactgccagccaacattgtgggtaatcagagggca
tgtaccagatggagcagttaaaactttacatattcaaactccaggaaatattctttagat
tttcttttgaggttgtaaacctagaactccagattaattagcagctgctactttgtatct
tttttgcacctattggagccaaataatattaaatgtcctcacttatactgagctattcaa
gtgtgagttctttgctgtaatggtattctatgtgtataattaagtgttatttgatatagt
tttagagttcgaacaaatgagcaagcaacaattataccttattatgatcttctctagtgc
atagccatagggttgctctcagtgcattaccaaatgcatagcaccagccaggcagcagtt
cctgttatcaacttttttcaccctttgcgccatgcataatttagagagttttattaattt
tgaagtggtttaatgtatgtgcatgttctaaagatctaggtagattgtatgactaagttt
agctttcatagagcaattgtttatgtatgtaaatgtctgaaaaatattttccctcaaatc
ttaaaaagctatggtttcatttaaatagattaactgacacattgcaccttcttccttacc
tgcaaggaaaaattcaggaagggaacgagtggaatatatttctgtgctttgcaaatttcc
tcattactttgctttcactttcaaatttagacatgttatatatagcaagaatggaaaact
gtcaacaatactgaaataccttgatgttcatacaaaattacaacacgatacaggaaaatc
atGATTGTTGGCAAGCAAAATTTT
Primer
(+)AAAGGAGAGGAGAGCATGTGTG
(+)AAAATTTTGCTTGCCAACAATC


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