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Human element [ hs528 ]


Position: chr18:72,507,962-72,510,295 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ZNF407(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTTGGAACATGAGCATTGAGAgcatgcaaatcggctgctcttttctccctcaggtggca
gacttagtctgtgtgcagatggtatttagtatattttttaatgtgttattttcattctag
aaaaaaatcttaattttatcatggtgacttgaagttattttattcgttctagagaaagtg
tttctgcagtactgaatataatagaactgtcatccaaatattgatacatttttttccagg
ctgaagaagtctagatatatttttgtgttttatatcttcagtatattaatggctttaaac
aaaataaatagctctttgtgcatgactgatagagcgttaggttttgttactcaatgaaat
aggcttgtggattagccccaggtcatgatcagtgcaaaaagcaggcaaatgcacttgttt
taatatctatttgattgagatcccaagctgcatttttctatatagcagagatgtgtcaca
cgaggttgtaagtatgttcagtatagtaatgtcgaaggacgcaaaatggtggggaatgtt
ccagtctgaagcattgtcatcttttctcctaatgagcctaaaattctagcatacaatgca
cttttggcatcttttttgaaaagcaagctgtgtatgcttgtgaaatgttaaaaaaattga
ttgactcccaaattgtttttaaattcagcagtttatctagtaggtgacagattaaaaatg
cacgctcgaagcttgttctctgggtttgaacgtaattctatttaaactgtaaaacatggt
gtcatcattttctgacagtccttgagacggaatttatctcatcattaattaaccatcata
tttcttacatagctgctgttaattagagtaaggtcatttgggagggcttattaagtggaa
caaattcagcaaatgttaagaaagtacggctgccagcagttcagcaagtttgacaagacc
tgctaggtgattgataactgcaccagtttgaaatctagacctcaaggaatggaatggtaa
ctggggacgagaagaagcaattgcaaacatatgcctgcttgtaggcagggaagagataga
ttacagtgcatgtagtgtcaggaggcttttttatcatgaattccacctctcttactcacc
tgttatttttagaacgttggatctgtttgtcaaaaagaaatgaaggctgaatagattcag
tctgcgtggccttcaaggggctccagaactgaaagctctctgatatgtgaagtgacactg
ttttatattaacataatttaaaaggacagaattggtttgcttgtcgttaaaataacagct
gtttgctctggctgacattgttgccaaatttcaatttagtggcaacatagatctaagtct
atttgtctgtgacctgcctcgctttggcaaccaatgaatggtaccagtgggtagatgata
aactccaacagatgacaggctgtcgacagagagaatgaaactgaatctgaaaatcttata
atgtgacacatctggtacagaattgtgtgcaggctagcctgctgcagaattgtattgtgg
gagtacaggaatgcactctgggtcatatcaacacgttcataaagggaaagttttcttttc
agattgagaggggtgaccttatattaattgacagtaattttgagcaattttaaggatttt
taaaaaggtctttcgtattattaaaggttcaggtttcacaaaatgagccagtggctagct
gaaaagcccaggctgctattggtgcctttagtgtgtgaagtgcttatgagttaattagct
gcaaggcattttttttttttttttacattttaagggaaaagttagccatatttcattaat
taaggttacaactatcatattaatgggaaaacaattaagtgaaataatgatgcactagta
atccattttagcgcatccgtaaagaccagcaggagggatcaaggtgagagttctggaata
gtgtacatggggaagggaaagcatgactcactaatgctggggaaaggcgcaaacgcattt
aaatttttttaacctttaagtttcattacagcaatctgtgttcttatttttcatgtctga
atcataaaatacaaaccagtacataaatttctggccagagacattgcatggaacagtaaa
aatgaaaggttttacaggtattctttctttcttcctttacacaaacacacacacacacac
acacacacacacagagtctctgaagctttaccttttctaatgacacaaaattgttgattt
ttttaattttttttctttatgaggaaaacatTGTAAAGCAGACTGCATGATTCA
Primer
(+)TTTTGGAACATGAGCATTGAGA
(+)TGAATCATGCAGTCTGCTTTACA


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