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Human element [ hs527 ]


Position: chr14:33,818,699-33,820,785 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NPAS3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGTTTTTGCTGATCTCTGGATGtctctcattcaaattctaagaagtgatttttcatcatc
aaagagatttgcagtatcattatagttgtttctgctcatcaactttttgattttttttgg
cttgtttgaaaactattctgactggctactttgttccttttttgtcatttgatagtccac
tttgttagttaggaaaccaaatcattttgtacattacgagtcacttgcttattagactca
cttttgttggaattgaatttgtccttttcccgtcctgatgggaatatgagcttcctgtgt
tggatccctgctcaaagggagcgaggatgctagtggcataactggagggagtacctttat
atccttttgtacagtctctgggcggaattgttgaaggacaggaaattcttctctagcagg
agaagggcgtctcccacttcggtacagaaatctcacactccgcgtcctctggcacatcac
tgagtgctggagagcacgaagccagtgtttactgctggtccttgggtgttaagcagccct
ccactgcttttattgtaccattaattgcacttaatgcagctgcatttctcgtacgcttgg
ctaggctctgaaaattaagtagagggtactttgttatcaaattcactgtaatgagctctg
gtgggacagggtccgttaagtttgaaattacctcgggccatttctaaaggacttcttaaa
atagttcacatctataaaagtttgtaactagataaatagccatggagagtgtaagaccag
gcagagggaaatccacatttctcctcagtgcatctttgataaaatatggatgtgtagaat
atttaagagtcatgtttattttctgcattctcctctgccttccacatttgctaaatttca
gcttttaggccggcagtgtgtgcattcaggtttagttgtttcacaccatggtttatgcat
acagactgcccccctacctgtttgcttccttttgaatccaaatcgtacattaaactagaa
taaaaagtaggacccccctctgggtgtatgcaaattggttcaagaagggatcacgcctct
aagaacaaacgcactgaagagacagctgtaactattagccaattagtttcatgttacaac
tactagcggaggcctgaaacggattcgtgatacctgactaatagatgcttaaaatgactt
taattcccccagtattcttagcccatatgactgactgctgtaatgctttgcggctaataa
aatttcagattgactaatttactgggtagctttaccaaaacatccaagtaatccgtacat
actcattagagacaggtccagaacactttcccttaggactgatttgaaaaacctcactgg
gatcagcctcactgagctttagatgcactggcacaaatcaggtgaaggatcttctacggt
tttagtgcagcaatttatctgagttttgtggttaaagtttgagcatgaggtaattagagc
cctccaagcttgaaattcatgaaccttattccccctttaatagactctatacaagcttgc
caagctcagtgtttgactgatatatatggaggctttgttaaaagcctctggtcaaaatgt
agttttaaaaaactcaaaatcagtttttctttatttttagctcttacaggtgtaaacacg
gaagattgcctcatgttataactgagggccagtcagcagtctgttgtgccctttggaaat
atacactagtcaataatcaaatacccgcagccgtgcagcaccacacctgctgcccagatg
gggtcgacgacaaacatgacatgaccgatgaggactggggaacagaggggtaaaatgctg
cagtctgtttggtttcttctactctgtatcctccttggaaaaaaaatggaagataacctt
taggctgctaccatttttgtagtaggagtgcttgggtatatatgtctctgcattaggcag
tcataatttaaccaagcttcccaatgcctaccatgtatatatgtctttggaagttgaaaa
tataagttgaagatttaaaaatgtcTAGAGACACATGCACACATGCA
Primer
(+)GGTTTTTGCTGATCTCTGGATG
(+)TGCATGTGTGCATGTGTCTCTA


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