Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm524 ]


Position: chr18:38,303,636-38,304,942 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Arap3 - Pcdh1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAGCTTCAGCCCCTGATACAgctgctgattacatgtccaccatatatatgtgacagaacc
cgaaccctgtgaccttgaataagtcactcaacctctccgaatctctggtggatgttgtaa
taggcctgcctcaaaggattattgtaagtgctcaatgatgtcatacacgtcggagtgtca
cacagacctgacagcaaacactaggttgatcctgggggtggggggtgggaggaggtgttg
ctggggctaccgagtccagtgcatattcccagcatccatagctcaccaggttccacctca
tccctccactgctgtgattatgcagcaagcacacactcagcacctacccctcaggctcta
cgctggacacaagtgtggtatgagtcagcctggggctgtgctgagcaatgtctgtcccta
tcaagccttctcagccctctccacttccttcctccagtccctgctccaatccctttcctc
tcaacctttaaactcgcaacctcctgaagcccccgctctaaacccaccccacctcatctc
tatgcctccagcccctctctccatccatcccaaacaactcggcgtttgccagcagcctca
ttcctacttctttcctccttcccctcttgtctctttccccatcctcaagcgcgacaccac
tcttgtctcagcctcatctcgctctactcttcttcccagtcctagcctttctcagcccct
attcttccactccatgtctcttccctcatccccagccttctcccattccagttacagggc
tctggaggttctgttgggggtggggacactgcccccagaggccattgtgggaaggcgcac
catgaggaaatgaagccccaatatcccagggcaggaacagccccggcacctgcagtgggt
ggagtccctgattgtctggagaagggcgggcactaactgcgttccaagcaagctccttac
tccccacccccaccgcccctctctcctctgggcgggccaccacgctgggacctcggccca
cagcctggctcctcacgcagctcctgttttattaacctgcttgtcgctgctctcgccact
gaatagggcctaggggggcgggggaggagatggaaggtgggggccgggctttgccggtga
tcaccatggaaacagcagctcggccaatccgtggccaggcaggccgagtgcagcgggcag
ctcggtctctgaagcctcgtgcagccgccggctgactcctgcctgacaggcggtccgcaa
cccctgcgaggcagaggatgaaaggggGGACAAGACCCTAGGGGAAG
Primer
(+)AAGCTTCAGCCCCTGATACA
(+)CTTCCCCTAGGGTCTTGTCC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.