Mouse element [ mm51 ]
Position: chr11:53,870,165-53,872,917 (UCSC browser)
Source: Lawrence Berkeley National Laboratory
Flanking genes:
Pdlim4(intragenic)
Timepoints: e11.5
Expression Pattern forebrain (6 out of 6 embryos) | hindbrain (rhombencephalon) (6 out of 6 embryos) | midbrain (mesencephalon) (3 out of 6 embryos) |
Embryo 1
| Embryo 2
| Embryo 3
| Embryo 4
| Embryo 6
|
Fasta sequence
CtCCAAGAGCAGCCTAGTGTCCatggttggagggagagtggcctgagcttgcctctcagc
ttataaggacaaggtaggggctctgtggctctgaacagggtctgggtgtgtatgtccatg
cagagtccaaaactatgctgacctcagccctcaggcacgcaaacacacactgcaatgtga
acagggcacacatactctcataagtgcatttaaagacacatacatgggtaaggacaatac
acacacacacacacacacacacacacacacagccagtctccttacatattcctatccatg
aatgcgaggtctcacatacactgggagccagtgctggtcatcctgaggaaggccatgtgg
ctaaacctgggatggcatgagaattcctcatttaggggacaagactcaagttcaggccat
gggtctgtctcagcctgggggatcacacacacacacacatataaatataatatatacata
aatatacatatgtgttatacacacatgtatatatatatacacatgtatgtttatacacac
actcatatatcacatatacaaatacatatatatgtctctccactctgtgatggggagacc
ctttcctagcaggaaagagaccagtttgggctcaggcagcttctagcaccgaacagtcta
gctttcaaggctctgcattaatcaccgccccccacccccattaaggtaccactttcccct
tcaaatccaaacaaaaagcaagaggcttgctggctaagtggggccccatcaatgctgctg
gggtggcaacagcagcaggaccccagtctcccatcaggcccagtgaaagcccctagaaac
ctgagcaccctcacacatgtatctgcagggtagacaggcaggcagggctggcctctaatg
gggaccagatgggttgtggtcggtaggggtggggcggggagggggtggggctgggctctg
catgagacttcaatggaaagagaggaatgggagtcagcagagactgggggggactgaagt
cctcactcaccccctactcagctcagcagggtgtgggagcagggtcattggtgagctctg
gcccctcctgtgaccacccatgcagcagcttctctaggtctgaactcagtggtttgagtg
gcagttctgtcactgaactggtgactttcatctctctgaacctgtttcttcccctaccct
ggagaatgcgatggctctctagccatcagagcccctcagtaggggatgaagtaagaccac
actgatcacaccacgcaaagtgcttcactggatggctgttggtgggaatccctgcatgcc
ctccccctctttttcctctctttgggtggcagtgttccacacaaccttttgccccctgcc
ctgagtgacagcttggtacttgggtcagaagaatgccaacaaaaaggggtgaccagacat
aggcaaacgctgcacccaaaggaacaggtggatctcttcttaggccgaatctcagctttc
agcagtctgggtgttcaaggcccccctactccagaaagcttttcttagccagatgcttct
cccaccctgggcggcccgtgtgccttctgtccctccagggccctgagaaaagagggtcct
ctgtggccttgcagagaacgtggtcctgaggctgcagttacccattcctcttggggatgc
gtgccaggggtgccctgtattggcctaggggtaagtgtagttttcttctccctaaatggt
tccagccagccccacctccacactcagaggagggggcagtgtggggacaatgagccctgt
gtctgtgctcctggggacacagccccgcagaggcggggagggtgtttttgtcgccaccca
tggagcctacgaccttttaaatacaaaaggggggcagcagctaaggaaactgctctgttg
attgtggaaattcactccccttacagtaaggagtaaggaccatcgctgctggcctttgaa
gaaaaactgtgagaaaaagaatgggggcaggagaagtccccctgcagctctagccaccag
accctgtttgaagctactctcagtcccagcctcccaaccccaaaggaaaggcatattgcc
atgccagctttcaaacgccacaggggagccccctggagcccactggccttgagtccctgg
tgactccctccgctcccaactagtctctgccctgtccctttcagcactgatgctgagagg
agccaggcgtctcacaggaacagcccgcccgccttctgctccctgttgcctgtttttttt
ttttttttccttctgccaaatctgttctcttctccctgcctgaagggcctcagacaaagc
aagctactaagatccaaatgtttcccgggatgagctgaagtctgggacaaatcagctcac
cctctgccttcaccaacctcccctgtcactgctctgatctcaaagcacacgcacccctgg
gcttcaggtgcttgtggggtgcatttcctcttcctacccgctctgtctgggtcctaaggt
ttggacttgaatctccttcctctggagagccctctctgacttcttattgaaatgtctctc
tgtcctggtcctttttcttccatgtggagagagcagacaagagcaggcccagaagccaca
cctctcatactgagtactctggattcaagctacatcacagattagcccaggagtgacctt
gtccagggatgtggagcatggtctaggtatctgGAATTTGGTGCACTTGGCTT
Primer
(+)CACCAAGAGCAGCCTAGTGTCC |
(+)AAGCCAAGTGCACCAAATTC |
|