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Human element [ hs493 ]


Position: chr2:223,079,383-223,080,439 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PAX3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tTCCTGAGTGTTGCTGAGTGGtgggcaaacattcaggctttttcaagcccagtacacaaa
tctttatgagaattttttctttcctcagtagattatccatgaaataggacaggtgtactg
gttattcaattacatcttacccaagacctggacaaaatttgaaacaaggcctcacagcat
agttcttaccatggggatttattaataacagttaaaggttctctaaaacaaaactttttt
tttgtaatttaagcctattttcttattttgtcattggtttcactcataaaccagaaacta
aaatctgcccatctgttctaaacataaaatgtgttcataataatccagatttataccaaa
tgtatttgtaagtattgctgaaatgagaggaactcaaaatttatgggctctgaggttgca
aacagaacttcctcttttcagggaggaaaatgcttaaaatgaatgtaggaaaggctcaga
aagcttcttggatatcaaacggcttcatagggaaaaaaatgtcagtgatataagagtaaa
tgaatcaaaaccatatggatcaaattttccttaaaatacacagtttgaaaaattaaggag
gaaaagtgcttggcaaaaatgtgttttaggttttaccaaacccaaaacatttgaagaatc
atttgcaatggttgatgaaccctaaatgcagccaagttggcccattttgtatactacaaa
acaatagaaaagattcctataaacagtgtaacccactgatactgtatttcactcaggaaa
tctttagaaactgttaccaaagaactgtggagtttgtagaagtcgggtggggggtgaggc
atgaaatgataaaagtttgttaatttaattggtcttgttttgggggtttggctatgtgtg
tcttgggggtaggggaacagtcagggtagtatttcttgcaaagaaaagttaattagaaga
acatgggccaaatgttaattagcctcacatcttgagcatatggtagtacttcctcggtac
tccatattccaaggcagCATTCCTTTTTCCTCCTGCA
Primer
(+)CTCCTGAGTGTTGCTGAGTGG
(+)TGCAGGAGGAAAAAGGAATG


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