Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm49 ]


Position: chr5:5,007,239-5,009,906 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cdk14(intragenic)

Timepoints:
e11.5

Expression Pattern
midbrain (mesencephalon) (3 out of 5 embryos) 

Embryo 1

Embryo 2

Fasta sequence
aACCATGGAAACAGCCACAAGTCCaaaaggactgtttctctacagtccattcaaatagaa
acaagggcgcttaaggaagcatcttgaagctttaaagctaaatgagattttcttttaaaa
ctatcttacacacagacacacacacatacacatatacacacagacacacacacatttaaa
tcctgactgacacatacgccgatgaaggtgaatattttaaccaatgtcacataatataaa
ataggttaacaactagcagatgaaattccacggtgggctaggagacctagcaggcagaga
tatgtgagacagtcaggtttatggacgttcaaagactctgggagaaaaagaacagaacca
tgtaaaccagaaccatgtgccccgccccgccccgctccccctcgtcaccactactgtact
ctggccatgagccacagaaacccagaagcatctgccgaggattctgacagctgtgcacgt
accctttaccatttgctcagctgctttgaagtgagagacagatattccgagggttctacc
atgggggcttcttatcttcaagccagaataatgtgttcagaatacaaatccttcttatta
gttgtgaattttgtcactcacctaaatgaacctatctgctgctcatgttttacagctaat
ggaggtgaacagaacacatagggttatctctcaggacaggcaatgcgaaggactgaaaac
aaagtgttcctccccgatgccagcagagctgctcattaaggacttggtaaatatgcacgt
gcaactccacatgctttgaataggtcctgtacaaatcctaccaccattcttcgtgtctcg
catatgaacatcatgaattcaagaaaaatgatttaatgggaaattgcaggtagaagggat
gtcggtttgctgtacatgccaacatggctgtggtgcgctgaaaatgaattaattggattt
gttaaaaatgtgacctgctctctcccacaaaagagggaggatacacaaaggaaggaagac
agaaagactttcacagactgatctttgctgccttgtacatttttaataaagactcagtat
gtgggaagtaattataatgactatcttcagttacaagatattaattttgtgctccaaggt
tattaaccacctttaaacatacggttaacaggcaagtgaatgggcttaatcctgatatta
agacacaaaacaaaccaaataatccgatatttcacgactttcaaagttgattgtctcctt
gacaaggctttaccagaggccagatatacaactgccattttagaaaagaggtgctggcag
tctctagcagatgcctgttgaaggagacttaatccccatttaatagccattcctatttag
gccagatataaaaggtcactgaggaaagaggtttatcccccattgattccaccttattga
gtttgtccagtgtccttatccaatgatcaacaaatcctaaaaggggacttcttaacatac
tgtatagctacatttgcaaatgtcaacaatccagatgagaatataaaatatttaagatta
atgacatttgatgtccaaaattccaagactatttcttttgattttttttttcctaattct
tcagggcaaaaaatactgtcaattaattctaaatcagtcatcttccagaaaagataatct
tctgcttctaactatcacaggacattttatcttaaagagcgttttgtatatcaagtgtct
gtgcgaaatgaaacaatgccgtccctgcagtcatggtggttatctgcattcacagatctc
tgtgctctaggaagagaaaatcctggtcaggtacatcaatgatcccatgggaaatttgta
gtgatttagttctctggcttattaaaagactcactatggttcaaaggcctctgaataaaa
tttgaaaaacattgccataaaattaagaaatgggagctaaatctccatagagaaatacaa
aaaatgccctgtgatataaattacctgtattatacaaacatttctagtaagaaatgctga
tgggaagctcactttcttagttctattgctacatcatgtgactcctactcatataattat
ttgggtttactttgaactcattctgaaataatatacatgaaaaaaactaatctttttttg
aaaagttttctcatctattaatttattttatttatttattttttgagataaaaaacttga
atttgctatactgtgaaagttggccttgaaatcctgatccttctgtttctgccttctgct
tctgcctaaggttaaaggtcacacacctttaaccttacttattattttacatacaagaaa
gtaattcttttagcataaatcaaatttaaaaactttaaaatactatataattcttgtttc
atagggttcagcattaaaggctaattagaaatttaagaaattagtctctgactgtaactg
agtaatatagtgattatacttgggtattaagcaaatctgaaggctaaaaatttagatata
atttagcatgatatagacaatacatagatgatacctcattaaaatctcttcaattgtttt
caaatacttacagaatatgtagaagggctcatggagaaatagctcaatggttaaagcagt
tgctgcatGAGCAACTGAAGGTGGTGAA
Primer
(+)CACCATGGAAACAGCCACAAGTCC
(+)TTCACCACCTTCAGTTGCTC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.