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Human element [ hs487 ]


Position: chr16:69,680,967-69,681,481 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NFAT5(intragenic)

Timepoints:
e11.5

This represents an exonic ultraconserved element.

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTGCTTGCAGCTCCTTTACCacctcttccagccctaccatttattctacctcagtcaccg
acagcaaggctatgcaagtggagagctgctcctcagccgtgggggtaagtaacagagggg
taagtgaaaagcagttaaccagtaacacagttcagcagcatccatcaacaccgaagaggc
acacagtcttgtacatctcaccaccacctgaggacttgctggataacagtcggatgtcct
gccaggatgaggggtgtggattggaatctgagcagagctgcagtatgtggatggaggatt
ccccctccaacttcagtaacatgagcaccagttcctacaatgataacactgaggtacctc
gtaaatcacgaaaacgaaatccaaagcagaggccgggggtcaaacgacgagattgtgaag
aatctaatatggatatatttgatgccgacagtgccaaagcacctcactatgtgctttctc
agcttaccacggacaACAAAGGCAACTCAAAAGCG
Primer
(+)GTGCTTGCAGCTCCTTTACC
(+)CGCTTTTGAGTTGCCTTTGT


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