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Human element [ hs479 ]


Position: chr17:37,566,364-37,566,971 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MED1(intragenic)

Timepoints:
e11.5

This represents an exonic ultraconserved element.

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCTGGTGCTTTGGTTTCTCAggtggtaatcttgatgacttctttttcttggtcttgttgc
tccccgagcatatttccatgcggggtgagccggaagaggagttctgcctttctaaagggc
tgcttccataaagggttgagaaatcctgggcaggattatctttaagaaggttcatgagca
tcgggtggttcttggtgttgccggccatcgaagagacaggtggcggcgtgtgatgaggag
gggtcggactcgagccaatggtagaccccccgttccctgtgatttgcaacaaactggtaa
gaattgggttctgagacaccttgctgaagtcctccccatggcccaccgactcatgccgat
ctttgatgctcatgctcatattaaacaaggtggtaatgggaccccccggaaaggtgttgg
ttggtgtagtggtaccactcattgggttgttgcctgtggtcatgccataccctgggctgc
tagccgggggcaggttctttttcaccatgtcttcaactgtctctgcaatgagggacagtg
ctggggtgtcggcttgaatggtttcagctttcctccgaatagccctcaTCGTCACAGGGA
TGGACATA
Primer
(+)TCTGGTGCTTTGGTTTCTCA
(+)TATGTCCATCCCTGTGACGA


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