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Human element [ hs476 ]


Position: chr1:244,217,325-244,218,426 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ZBTB18(intragenic)

Timepoints:
e11.5

This represents an exonic ultraconserved element.

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTCGCTCTCCTGCTTGAATtcatgtatgaagggaaactccagttcaaagacttgcccat
tgaagacgtgctagcagctgccagttatctccacatgtatgacattgtcaaagtctgcaa
aaagaagctgaaagagaaagccaccacggaggcagacagcaccaaaaaggaagaagatgc
ttcaagttgttcggacaaagtcgagagtctctccgatggcagcagccacatagcaggcga
tttgcccagtgatgaagatgaaggagaagatgaaaaattgaacatcctgcccagcaaaag
ggacttggcggccgagcctgggaacatgtggatgcgattgccctcagactcagcaggcat
cccccaggctggcggagaggcagagccacacgccacagcagctggaaaaacagtagccag
cccctgcagctcaacagagtctttgtcccagaggtctgtcacctccgtgagggattcggc
agatgttgactgtgtgctggacctgtctgtcaagtccagcctttcaggagttgaaaatct
gaacagctcttatttctcttcacaggacgtgctgagaagcaacctggtgcaggtgaaggt
ggagaaagaggcttcctgtgatgagagtgatgttggcactaatgactatgacatggaaca
tagcactgtgaaagaaagtgtgagcactaataacagggtacagtatgagccggcccatct
ggctcccctgagggaggactcggtcttgagggagctggaccgggaggacaaagccagtga
tgatgagatgatgaccccagagagcgagcgtgtccaggtggagggaggcatggagagcag
tctgctcccctacgtctccaacatcctgagccccgcgggccagatcttcatgtgccccct
gtgcaacaaggtcttccccagcccccacatcctgcagatccacctgagcacgcacttccg
cgagcaggacggcatccgcagcaagcccgccgccgatgtcaacgtgcccacgtgctcgct
gtgtgggaagactttctcttgcatgtacaccctcaagcgccacgagaggactcactcggg
ggAGAAGCCCTACACATGCACC
Primer
(+)TTTCGCTCTCCTGCTTGAAT
(+)GGTGCATGTGTAGGGCTTCT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.