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Human element [ hs471 ]


Position: chr7:35,254,518-35,255,251 (UCSC browser)
Source: University of Chicago - Nobrega Lab

Flanking genes: TBX20(intragenic)

Timepoints:
e11.5
other

Data entered by Marcelo Nobrega (nobrega@uchicago.edu).

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCAAATTCTGGATGGTGTTTTTCTAaggtgtattcctcttcccacaaatt
gcacataactgctaaattcatgcacttaatttgttttttaaaaaaagagt
gtaatagttacatctctaaaaagcccacttaataagatcatttaaatatc
tttcacataacacacacaagacaaataatttcccaagtaacacagtgaaa
cattttgcttttctgaaagaacattatattcattttgcccttgctagatc
actggtatcattacttacgctagtctctaggaggggaaaagagggatttt
attgaagtgatttacttgtgttaggcctggaagtgaactgaaagcaatgg
cagttcttatataaaggatggcataattgaattattgcctaagtgattga
aaacagtggtgcatatcagggccatctcttcgaagatgttacaaagagta
gtcaggccatgatgtttactttatgtctaatccctgtttccagcagaacg
agaagtgcaaagaatctgtttagcctggaagcccactgtgagaatttcta
aaatactgtaccctgaaaaatgagaatggctcaccgaacaggtcaagtga
tttaggtatcacaagctaagacactatcttgtaatgctaattctgtcaca
tcccaatgcaacagactgtagttttagtagacttaactttggatttaata
aggtagatAAAGTGGGTACTCTTATTGAAGGTCA
Primer
(+)CCAAATTCTGGATGGTGTTTTTCTA
(+)TGACCTTCAATAAGAGTACCCACTTT


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