Mouse element [ mm468 ]Position: chr4:89,087,737-89,092,044 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Cdkn2b - Dmrta1 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence GTTTGACTGTGGCCTGAGGTagcactcagactgtctttcaccattttagtcattctgtgg ttcccttagaaagagctgaggctgtgagtaacctttacctcttagttcaaagtggatttg taaagcagagaataaaatccccccttcccacgcagttgtccttggttaagacaaacttag agagttccagagtctatttaaatattatgacaaaacaacaacaacaacaacaacaacaac agcagcattaactataacaacaatagtaacattcgcaacaatctagacatagcatgggca ttttatattaaacagtgtctttataagtgctcgtattaaaaactgaaacactggaaggag gctggggagggcaaatgtgagaattaggtgtgtgtatgttttgacacctgatttttgagg cacgatataacatatattttcaacaattaggcaaaaaaaaaaaaaagcaaaggccacttg atattgccacatggccagtaacgtgtttgcttttgggggacatacaactccttcctcagc agatgttgcagacactgataaagctggtatgcttacagtaccagccctgtcaattacttt agatggtctctcttcagcagccattccaagtgggcaatagtgatcatggttttacaggag gaaacgaaatattggaggctggctgagctgagatccgagtggcaggcatatcagagcccc tgactgacatcttctcacttctgaaccagagtcctttctcctgaactgtgctgaccacac ctttcataccaagatacgttgattgcacccagagaccaaaggacaccgtgatttgatccc ctgagctgaatgctttccatgttccaggcagtgtgacagtgtctctcacgtgagaaaggt aagagtagtgaagacaggccaggaggcaaagaggccagatatcagcaaggaatacttttt ggcagagttaagcacaaacagcttagcattcagaaaggacttttctttgaactggggaag ttcatggcagctttcccagggatgggtccctgaggacaaatggtatttagctagcagaaa agggggttaagtgcgtgcctagcagcaggaacagcatgtccacaggcacaaggttctaag agagccctccacttctgaggactagccaggagtctggcatgtttagagcatagagtagtg gagagaaatgaggcaagcatgagaaaggggcttgtgaaacttagttaagcaatgtcagac tgtgaaggagttgaagtagatgaagaaagggaatgaaaatctgggaaattggcaggagag atggctctggataaagggagcccatgtgtgatgttggagattgcctggaagactgttgtt tcatattttttaaattatctgcgtttttttttttttttttgagacagggtctctattatg tagctctggatgtcctgaaacttgctattgagaccaggctggcctagaccttgtggatat ctacctgtctctgtttcctgatcactgatattaaaggtgtgtgctaccacgccagcttgc attttacagtcttcgtaacacacatgttcatatgtgcagacacacagtatatacttttta acactctgttttaagttgaggtccacaataaagccaattaatgacctccccaaaagccac catttcaaataattgatgtcatctcaaattagaagcaattcagtgggcaagcaagagtta ctcgaggtgtgatttggtgcccttgctggaggatagtataagaaggaaaatatttaaacc acatttagatctgatatagtaatgataattgtttttttgtaaagtacagaagacccccac atacttttgcactgatatagatagtacaacttgtaaaaaaaaagctctgtgtatgtatgt gtgtgtgtgtgtgtatctgtgtatggaagaggtgtagcagaattgtgctatttcatattt tgaactatgtattatgtacctcaaacataaaaagaaaaaaaattgaggcattttctaaga gggacagggagatcactggtagactggttggagcataaagcatgaaagtatgttacagac cactttcttatagttaatttttcttatagtttttaatgaattattttatttatttacttt tatctcgatcatgccccgctcctcccctttcagtgccacccttacaaatccctctcttca ttaccttctctgaggagaaggggaaccatccccttgggtaccattccagtcacagtaggt ctaagtgaattcttgcccactgaggcccaaccaggcagcccagttaggagaagggaatcc aatgacaggcaactgagtcaagcacaggctctgcctcgattgttaggggagccacatgaa gaccaagcagcatctttgttacaaatgtggcagggttgggggggagggggcttaggtcca gtccctgcatactctttggttggtggttcagtctctgtgaatccccatgggcccaggtta gctgactctgtgaaattatagtacattatagttgaataaagggatatttaaaaactatag ggatctgttggaggtggatggggggagggacctgggtgggagaggggttgaagatgggaa cagggatgaggatcaggtgggggaaggggggaggtggggtgtgcaaaagggctgagagtg gtggtggttcttgtggtgtccttgacccctccaactcactcagttctatcccccactctg ccacaagactccctaagctctgcctgatgtttggctatgggtcgtctgctgttggaggaa acatctcaggagacagttatgctaggcttctgtctgcaagcatagcagagcggcattgtt agtgtcagggattggttcttgcccatggaatgtgtatcaagttgggccagtcattggttg gacattccctcaatctctgcaccatctttatccctgtgcatcttgtaggtaggacagatt ttgggttgaaggttttgtggatggtttgatgtccccctccctcaattggctacaggaagt gaccactttggtcaccatatcccctgctggtagacgtctcagctagggtgaccctataga ctctccagaacttcctaggtcccaggtccccagctactcccagagatgcccggcattaaa tacagttctcactctcagcccctttcacaccccatctcccccacctgatcctcatccctg ctcccatcttcgccccgcctcccacccagctccctcccccatccacctccaacagatagt ttttagatatccctgtattcaactataatgtactataatttcacgcatttctaaggaagc tgtggtttgcgacccctttggcaacctctgtcttcaaaaatatttatattactattcata acagtagcaaaattacagttatgaaatagcagtgaagtaattttatggttgggggtcacc acaacatgaggcactgtgttaaaggctgaggaccactgttaaggtattaactctgcagaa aataagtagtgtgtagatgtgccatatgctaaattttgtttttccatcctgtggttgaag gacattttaggtttccttaccacttgcctgtgaggagtagttctgttaatcattcctgtc tctgtcatttgtgtgaacgtatttttccccttttaggtggccctcatagtgtagactgtt atatggataaccactatttaactgtttgtggaactgttaaactaactgtcaaagtggcta tgccattttgtactcagatgaaaaactgtgtgaaggtttccacttctcattgccaataag tgtctggggctttgtgtttgtttgtttgtttgtttgtttgtgtttttttgcctttgactg actaagcctagtggttttattggcattttcctgatgactatcgatgcccagcacattggt gaaatgctgtctgtttaaatcttttgcccattataaaaattgagttgcctgtcattttgt tattgatcagggcttttggtgttcttaattttcatttgaggataatagtacattagtaag gaggcacaattctctctctatcccttattttcctgatactccttttaaatccctctaact tttagagggaaccttcggggcatctctttttgcagactgtttgcatgacaaaaatttgta ttatgaaagttggcatggtccctcctcagtgaggtcttccggaggggcagccacaagaac cctggcttttataaaacgttcattgttcTTCATTTTCTTCCCAGCCACPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.