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Human element [ hs46 ]


Position: chr16:54,523,175-54,524,067 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: IRX3 - CRNDE

Timepoints:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCAAATTGCTGCTGAATAATTCTGAgacatctgcagagattccaaggcagccactgtgct
ctgtttaccaacacaattaaacctcgaccattccctgctgcagtacaaatataatcttat
ctacttaacgtcagccgattaagtcatcggggctgcaaaatggtaaacagatattaataa
ccaacctataagtgagtcatttgagtgaagtggaatatcatggcaggttcttaggcctta
aggtggaaaagttcacaccttcctgacactgctataaaacactgcaacattacaactttt
caaccatatctaaaaggccaatttaggtttattcccatccgcgtttatggccatggttca
gcaggtgtaaaccggtaatagctgcagtccagctctgggtggatgccagcacagatgtgt
tcagtcaaatgactaattgaaaaccttagacaaaatcagcagcctggccattttgcctgc
ataataaaacagtgctgataaaggcagtggagaaaaaaatccacccatctcatcatcagt
gccattaacaatcatgagtaaagatgaaaacaacgcatggtttattctgcaaatgaaggc
atataactagatggtttcccaggggcccattacccattttaataatacatcaaggagcct
gagcaaacagtttgtatgtgcaaaccaaacagaacaaactatttacagttaccgcataca
gagacaactcccagcactctggatttaacaaatttataaaggtacataacatgatagcta
ttagcaaaattaaaagagaaccattatagacttagaggctgccacgctcaccagtgaaga
aggaaaggcaacaccaactttctattgaGAAGAATCCACCTCCACACTTTTTT
Primer
(+)CCAAATTGCTGCTGAATAATTCTGA
(+)AAAAAAGTGTGGAGGTGGATTCTTC


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