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Mouse element [ mm450 ]


Position: chr6:143,245,793-143,246,980 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: D6Ertd474e - 1700060C16Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gAgCTGTAGAGCCATTCGAACACcttcctgcttccacaaggctgggcactgatgagttat
gctgggcctcagttatggctgctggacgcaatacaagacacccagttgagtgtgagcctc
aggcaaactcatgtttaagtgtaagcatggcctgcatttttattgctaactcttgtcagc
ctcatacccttgtttaccccttaatacatacaatctccttatttaaaaaaaagtctctgt
agggacagaacaagaagcataactcagattaggtttctgtctgtgtcaatgtcctggatc
taaggttggggagtgctgcagagtacatggtatgttctgttacttccttcctgtgcgaac
acagctctcgttgtgtgttatcctgcaagggaactcgcatcgctatgagacgatgcctct
ccccccgctatttattacaagagatccattgcattgtcaaacgtggctgcagttccatcc
ctggcccagaggcacgcagggtccccacatctagcctttaatgtcaacttggctttcact
gacactaataatcactcattattccttctcaaaccctaatttaattaaaatatatgttta
caccacgagcattgttcctaattttttcaacttcccaatataaatagcttttttatgtag
ataattaaagccatctgcgtcttggtggttcagtcattctccaagcagctcccgctctct
cagggaattaaagatactaaagcttgacttccatgggggaaatgtgaccgaaatgccgtg
ccagtgtggtccgcaaaaagaaatgaaggctcttaaatattattggaaaaattgatttca
gttaactcagacttacattctctatttttttaaaaagtaagtgtgtttaagggtttatgc
aataaaaaccctatctgaataaataaagatcctaataaaatctaacatttaaacaaaagc
tctcatgtttctttatgaggattcctccaggaaattttctttgatactttatctttagaa
agggagggggacatggtgaccttgaagggtgtaaggtcactgaagaagtcaatgacaagg
caaggtcaggcaaacccagaaagccaagagtaaggaaggccaggatgtcacagtgaatgc
ttctaactccactcacgcagcctcccttGTCTTCCGTGTCTTGAAAAT
Primer
(+)cacCTGTAGAGCCATTCGAACAC
(+)ATTTTCAAGACACGGAAGAC


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