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Mouse element [ mm440 ]


Position: chr11:88,341,352-88,342,981 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Mir378b - Msi2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAAAAGAGGGAACCTTGTCTgacctttctggaaactcccttagctcctgagcacagggct
cctgctgtgactgaggaccaacaccttcttgtgcctacacacaacagtcactaaatatgt
ggctgccgtaagtctgtagagtttatgtagttcctcagatatccactgtcacttaagtat
taagggtaatgctcccacccatagaaacagggtatgggagattctcaatcatagaatact
gacttctatggggtgtgtgtctctctctgtgtaggagacatggacaaaggatgctgggag
acatacaggacattgtccagggcatatcgttctctgtggccaggtggaaaacccttgttt
agggtctgatctgccacagatggaaatgttttgcatactatttgactttcccacgctatt
tgactattgagctatggcatccagatgtatatactggggacatctattactaccctgcac
tcggaggaaaggagataaccaggaaaagaaccgcaaccagcgactttcttgattgacgtc
tcagaaaacactgctatgcccccctgttaaagacagaaggggaaggaacaggcttggata
ctacagatccgcatccaccctcacactttcatgagaacctgcatcttattctcctcttcc
atggtgaactctgtcccctgaagcaaattcattcattaaaaaaaaaaaaaaacttcccca
aaaggaagaggaaagcgcaggggtggggggaggagggagggaggggcacgaccaaatggc
gaaatggtcaaatcataacaagtctggctttcctcctgtcagctggtggtgatcaaaacc
acattcatattgtctgctgaggctaaacagaaggctcagaccatctcaggaatgtgagct
cctgcagtgacgtccctcacccccaaaacttaccagtgggggtttccagcaggccaggga
gaattcattgacccctggccatcgctggacacttgcccagccatggggtactcagccacc
ttccctacttcaatagtgagaaggttctggaagagaggccaaagcctagcttctgctcat
accctccccacagaaacaattagagaactcaggctgtggctgccaagttcctctgtccaa
tttggtagatattttaatagaggaggagaattcccaggggcccccaacggaaatgcccca
tgtcagggaacgtttgttttcatttccttcttccatcaatgaattcgactcatggtaaca
gcttggggctggagcagatccacacagaagctaaccagaagcatttgttccttgaaataa
atctctctttggggaatgacttatatatacatcccagggagggagtacgcacacgtactc
acacacgtatgtattatgcatcacagacaaaatacatgcacaaatccccaggcacgcagc
actgtgctcttcggaagggaaggtgatctgccggttagtacacttaatgaaaaagctgct
tggcgaggcacctcagtgatggaggggctccttgtaagtggagaaaaaacagtctatgaa
tgtggagcttgccacaagagtacaaggccatagtggtatgggacgatGAAGACGATGACC
GTAAGAGcaG
Primer
(+)GAAAAGAGGGAACCTTGTCT
(+)cacCTCTTACGGTCATCGTCTTC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.