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Human element [ hs440 ]


Position: chr1:83,252,219-83,253,218 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LPHN2 - LOC101927498

Timepoints:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACTCCTTTTTCCTTCATAGTTCCAattacctcattaatatttgtttaga
tgcagcaagcagaaaatatactttgtaacatctgtttgttgaacggggtt
ttcactgaatcacaattggccactaatagctgcaacaaagaaaattatga
gaagattgtttctaaagcacaaatgcttttttgccattgttttccagcag
tgaatatgcttgtaggaaaaaaaaagaaataaacattaaagagagtagca
ctgtagtctcctggctatgtatgtcccatattctgtgaatgcgagcatca
ttttgttactggatagctaaacaactgcttacgtgatcgataaagaacat
tatcttaaatcatagcatgaattcccaatatcatacataaaatcaataaa
acagacaaagaccaggactgaatttttccactaaaagattgcctgctgct
ttggaaaataatatttagtaggttggattttttttttgttgttgttttac
taattatgagctcagtggcagtttattctgcagtaaatctgctggtgtga
gattaaacctgttattgaacagagttttgaatctactgcaaggcactcat
cactgctggagagtgaacattgctgttatctcatttaaaagttggccagc
aaagcagcccatttgtttaaaatgcaattaagctggtgtcttgaagagaa
attagcaaggagtacttcattttggaggcataagaggtctgttcgtagac
acattaatcctgtgatttgggacatcgctgcaatttgggaccctgttctg
aaaggctgctcggaacacacagcacaaaaggggaaagctgggtgagaata
aggttcagttttgttcttgatcaaaaggaatcacgcccacatattcacac
cctaaaccttcagaacagccttgcactttacaggaaccaactgaagaaat
taaaaagcaagtttaatgaatgttgCTGCTGAACTGAATCAAAAAGTTCA
Primer
(+)CACTCCTTTTTCCTTCATAGTTCCA
(+)TGAACTTTTTGATTCAGTTCAGCAG


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