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Mouse element [ mm430 ]


Position: chr1:194,615,787-194,617,278 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Hhat - 1700065J18Rik

Timepoints:
e11.5
e14.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
atCCATGGTCAGTGATAGGTTTagaaagtcctgattttaaagctgggcatggggtttgta
cctgtaattctagcattcggggacactagtcaggggagattttgagtttgaagctagcct
gggctaaataggagattgtgagtttgaagctagcctgggctaaataatgagactgtacct
ctaaacaaagagagaaaaacaaaacaagacaaaaaaacagatgctgaagaaagttttctc
acgaaaagcaagttcaggtccagggtcaccatgccagctgcaaatgcacaaaatggcaac
aatggcttcacccttgagttccagcagcctgacagcgggtgtccagaagccgatccaggc
cctgacagcaaagaaaagacctctgacatctggaaccagtttctgccacgtcacacaacc
ccctggaagattagccaaactcgctttcagcttacggcttgcagctgtttggaatcaccc
cattgctgctccgctgagagacagcctcactgggtgtgctgtacagtaaacaagcgaacc
tctgccagcactggcatccggcagtggtgagatttgcaatgtggcgaattgctattttat
tcaatatacggaacttacaatagaaaagagattggaagttacttcaaacttgtttatgct
gttacagtgggctgggaaaagcttttgtgctttggttttttgacggaatccctgcctgga
aggagcgggcagaatttctgatggtagcctgtctcaaagtgctcagagtatgtatgtcct
gacacacacagagacctggaaactctctaagactgcttctctcaggcctggtgacagata
cctgccacttgagaaaggatcatgagttcaaggccagcctgagctataaactgagacctt
gtcttaattttataaaagacctctttggacaagagggtttggtcagtggttaagatcacc
ggctgctcttgcagaggatctggggttcagtttctagctcctatgtggcaggtcacaacc
aactagctctcgttctaggggatctgatgccccttgtggcctctatgggtgttgcgtgca
catggtacacagtatgcaggtaggcaaaacacacatataaaatagaactgaataaaatct
tgtaaaaatacccctttacccagcattagcgtcatagtttgagttagcaaatactatgta
tatcctgtcaatctcactttgtacatcaaatgtcatgctcctgtttttaatgtatacata
tgtgtatgtgttaatacatatctggtagcaatgtgtgcatatgcatgcatgaatatgtat
atatgtatgtgtattgcatatgtatatatgtgcatatgcacgtgtataggtgcatatatg
aacattcatgtgtgtggtatatatgcatacatctgtatatgcatgcatgcgtgtacatgt
gtatatatgtgcatgtgtatacatgtgcacgCACACATTTGCATAGATATCT
Primer
(+)caCCATGGTCAGTGATAGGTTT
(+)AGATATCTATGCAAATGTGTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.