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Human element [ hs424 ]


Position: chr4:111,914,861-111,917,609 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PITX2 - C4orf32

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAGACTGGCTAAGTCTCTGTTGAtaagaaagcaattctgagtgaaaaatctagtaaacct
gaagaaaaactgttgtttaaatcaataaatatctttgagatatgcacctataaattttcc
cactagtgcatgtataaacatccactttactctctgtgttcacctatacagtatacaatt
gtttcctccaaaaaaaaatcaatatggctgtgattccgctatagttcattcactgtttat
ggatagggattaatgtttgacctctccttgccttcttgacttgaaccaattactttagaa
taatttttctggtttaactttttatcacgttttctgacattttagtgaataatatttgac
agctatgaacatctgcaaaagttattgttatcataacttgagctcaatggaactactgtc
actgatgctctaaagatcatattgcactgcagagtatgaacacacttacattaaaaattt
atttgatttttcagtaggaatctttgcttagtttgctttaacaaaggcagactgtttcaa
atttttttttgaaaatgttacctgaaggtgggaagtgaatttgcattctgtacaggggaa
gtctcaaagtctctatttttcattctggaattttatatgttactgttatgcaggaaacag
cttttaatcttctctatctctgtctactttttcttaaatgaataaaacaaaaatctttgg
aacatgaacactgaaacccagctttgtgcatcataggtttgtgagtaatttctgataaaa
gtatttcattttagtgtcctgatttcttattcagtttgcactcagggaaactggtatatt
gcattctccttgaagaaagccatagagagagaaaatgcagttagtcatttatgtgcatat
aacaatataaattgtaaagattaaggggaatcattttggggaggatcacaattttgcaac
taaacgcacttaaataattacctttttaagcaacttttattgactatgcagcaggataaa
aagtaatcttacttgttttaaatggcataaagcaaccaaatgccattagcagagtgttac
atttcttatttcactaagattgttgaagcttaccagaaagagataaaaaatgtataaatt
caggaacactggctagtaatatcccaaaccattgtcagtggactcctactttctcctgcc
aaaatatgtggaagcatgcatggattgtactagattagtaagaggggctcgtttccgtgg
cattagccaggtatcttagcaacaagaccataccagattctagcagtgctctgtggtggt
gcatgtaatatcctggacataatctgtcttttaattttctttggattgtagtgatattac
agatacatgtgttcagttatagatctttatttaataagaagaatgccttagctgaagatt
tgtactatgccaggagtgggcaactcacaataatgttgctggcgttttagccgaggtact
gccttgtctcgcatttcagattgacaggaaaacttactcccttcattaagatgtgcctca
tagttcatatctttatgctgtggagatgaggatgctgctggaattcataatactaagaac
gttatttaatgtcagatagaatgcaaattgctcgtacaattgaaatgtcatctaaaacat
gccaccgtatgcaacaccactttattataagtcactgagagcaatatcttaaatttggaa
ttgcactaatccttcatctgctttgtttacctttcatctataatagagatgtcgaatttc
ctccaaactggatttgcatgttttaactgcttgctcacatagctgaatatgtgtggaaga
accatataggggtacttcctttgattttcttgtctttttgttgtttgtttaatgcaaatt
aacagcaaaagatagctttcaaatatgagacaaaatgccgtgtcaacccttttggggaaa
taagctaaagcttatgaaggaacatttgattatttaaaggacaaattataatacaaatat
gctgtcggtttattggtaattgattttcttggtaatttagtttcatgcagtattttcttg
cattaattgaaacaataattttataagattaatttttttcacagtgaaattacatgtgag
ctatttaagacatttgtcatgcttgcttggagaaagtgtccagaacaattgccatccaaa
ataaagctatcttgacataaaaaatgttgtttgtatgcaagcgttcttaccttgagttct
aaatattcattcaagatgatggcttatcttttatagatcagttttcagtaccaaagaagt
cccaggacacctcttgaatctgtaaattctagggttttccataaataattacatttttac
agagatgagagttgtaagaaggaaagtaggaagaaagaagaaagtccttaaaaccccact
ctttgggtctgtcccctcctactcaagatcccctcttcttgcagcacagcttttcccaaa
cgatttaggctcttaaatgcttagtaccttttgataggctgcagtgaagattctgttttg
tttgcttcatattatatagtattttcgttgttcataacagagtattctaaatctcaatat
gcatttgtagggtcttagagttgtacctcaaaaagattatttcttggtgattatatttga
tataaaacttatgtaagagtgccaggACTCCCAAAGTTCAAACTCTTCC
Primer
(+)GAGACTGGCTAAGTCTCTGTTGA
(+)GGAAGAGTTTGAACTTTGGGAGT


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