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Mouse element [ mm409 ]


Position: chr6:51,122,426-51,123,472 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: C530044C16Rik - Mir148a

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GATGCTGGCTATTAGTGGAGtgcctaggactacgatacctgggacattgagggcttgaat
tgtgtgcttttccggaaatgcacgaataacacggctataaaaataaacttctggcgattt
taagtggattcctagaggaaagcaagcctcctatttctctttactccctaccaacagtta
gcctggtgaagaccgtcctcagtgaatcccttccaggccctcctagaggatctgtggagg
accgggcacaacaatctgactcagcgggaaatgcctgcagctaggactgcaccccaccag
tgtcagcacccaccacctcgccataggtctctttcaccttagctctcttccttctcctta
cacctcatttctttctttctctcccccccttcctttctctctctctctctctctctctct
ctttctctctccatccctctccctctttcttttttctatgtgtctctgtctctgtgtgtc
tctgtctctgtgtgtctctgactggctcactcatccacgcacgcgcacttgtttccccct
ggctgtcaatcacacccgcacaccctagaacgcttgcgcactggaaaaatccagcctccc
accaaccccacgccctttctactcgtcaccctgccatattgaccaataagagcatggatc
tgggggcggacttcgagaaataaaccaatgagagagcgattggaagctaaggctcaagag
aagtaaatccttcgtggtccgcattgagtcgcttgggcgatgatttatgcgcccctttta
ttatttgtaacactttgggaagttattaagaggaagatctactgcttcctcttttggggg
tggaactggatagtaatatttgtcactggcgggttttagggtagagtggtgcgaggtgga
aggccgtcggagactggtttgttttgtgggtactgtttttcattacacgacagattaccc
ttttcattacaagctgtagacagggccaacttcgaaggtcttcttggctgaatgatcttg
gattACTCAGAGAGCTGAAACCTGaTG
Primer
(+)GATGCTGGCTATTAGTGGAG
(+)cacCAGGTTTCAGCTCTCTGAGT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.