Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs404 ]


Position: chr2:144,712,189-144,713,913 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: GTDC1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAACCACCATCTCTTTTGGTTCtatttttgacttgttatgatatacattacttagatgag
gactatgttttaaaatatattaaataggccatagtattttaaaaccaatttataaaattc
atttccataagtttctcattttattttttttaaattatctcatgacaataatacaattat
tcatcacttcaattcttaggcactaccagttaaataacagagttccaactgatctattgt
taaaaagactagtaaatgacctttttattccaattaacaaatcatctgccaaatctatga
atcttaatattcagatctattcacttcaattcatacaatttatctgcaaatagttgttgg
gcttttgattctaaatataattagctgataattttgcttggctgaattacttttctggag
ggcctgcaaaggctctcagtcgcattatctagcaataatgaatctgataggtgaaatttt
ttactgtaatgaggatgagacacagttgtgacacctgagtctactaataacagaagactg
ctaattatcgacagcacttttttgtgtgatgcaaggagaaaaaaaatccctcattattaa
aaaataaaaagttacaattataagtgacaccggaggagagtaaataaaatggagtgatta
aaacattgctgctttaagggtgtttttaattaagtggaaatgctaatgttgtcatactta
gcagatgggattaaaattagttattgtaagtaactcatattttatgttatggtttccaca
gcatgtctacaagatctaagaaagtgatacattccataagacattttaaaaatgaaattc
tcatactctttacaactcataataatgaacatcatgaataaactattgaaaaaaatcctg
ccaaggattttaccatagtgacttaactagcaaggaatgtaaccataatgtactggactg
ttacaatctcactgatggtatgccttttgctttgctgattgttgcattccctatttcaat
cacactcaacaaaaacaaaagtttggtacttgggcatttagccaacatcaaatgtggtgt
caagaaggtagggcctggatacaagaaaagatcatgaccacccactaaggtgatgttcta
aactaaaacagaggatgcatcacataactgcagataaaaacctaattgcacactttctcc
tactttatttgtgtaaaattttccatctgctacatctaaagatgtctaaactgttagtat
caaacctgcattcagctgccagctgtgcacattaaggattgcaaaacactaagtaaatga
gccagcgtgaagccgagtggtagtggtccatctgcccagggctgtggggagggaccctgg
tacctggtccttttcagagcctgtgtttgcttcagtggataagaaagaaaattagccaca
tttctaagtgtctccatttacaatacccaatttatctgcattttcctggataacttctgt
gtatctgatgagtattcttctagagcaagttaatggaattcatctctttttgaaagttct
ttggatacattttaataaggcctctttagaaattatcttgaatagtttggctgacaagat
tctaacaatttttggtgatattctgaaggagattttaaagtaatcctttgtgaaatttat
ttctaaagggtatagagtaagtcAAATGGCTTTGACTCAATGATG
Primer
(+)AAACCACCATCTCTTTTGGTTC
(+)CATCATTGAGTCAAAGCCATTT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.