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Human element [ hs396 ]


Position: chr2:60,137,953-60,139,763 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927285 - MIR4432

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGGTAACCCTAAAAGCGTGTTaacatgaaatactaaataaaatgctactcatctataata
aatcttattacacattttggcaattttactactaacatagtgaaggtttcaagcaatgtt
tgaaaatagaaatcttaaattgaatcattgttgcatgaatatatgcaaaatattcatttc
tagcactgtgagggttgagtgcttttaaattggagaaatcactcatgacttcaccttttc
atgcaagataaagttgtatgtggtaacatcattacaatgtcatgaaaggagtggaaatca
tacaacagtcctgcctaaagctaatatacaaaaaaagggcttcaatatttttcaatattg
ttcaatatttaaaggtgcagtgcagggctttaaatatatttaagaaaaatcattaggctt
tggatgtcagtgaggcctttactgagctcagagactaataaaatcattgatgagatctct
ttaatatttaacggaattcatgtcttaggtagtcgcgtattttccactcctgtctctgca
gatggggctaaatacagattttttaaaaaaagatttatgagaaagtgattatagattttc
ttaactatagcactaaaataaaactatttactcaatatactgtcataacaagagaaaaag
cattatgacattttaataggatttcctatcacttctttaacagaagacagcttcaaaagt
agctgatacatttacacacactaacaatcagggaattcaatcagtgaaaacaaatgagca
gattttcaaatgagttgccgaaccatgaatcatcaatagagggttaggaggattgtgaga
aactgtgattttaaaaaaatatattgaggacaacaattattgttttgctcatggatttct
ttttttttttcctaaacagttatttttaaaaattaggagccaaagtccagactcaaaatt
ctatgtcttgtgtgtgagcacgcatgtgtatgtgtgtatgcatgctcactgaaatgagaa
tagctctccttcaattatattatttgtgtagagttaatctctgggagaatatcagtctca
ctaaggtaaagtaaggcattcacaggctcaactttaaaccctgtttatgtgtgaaattga
tagctccatttctgttatcaagtcaccagtccagcactttaaagtcatggtctgcaaaat
aaaattgtctcccttttgaatgccaacccctaaaaccaaatattcccatttattaaaata
aaaatgtaaatttataaattatcatcctatttttatgtaaaagcattctggaaagtacca
cataccattgtcacatggcaaacagccctccccatcattggctgttgctaggctaccagg
aaatggaatggaccattgccaatgatgaattaactgatgagccaggatgacagtaatctt
tgtcactggatgcagtagctgtctgagccctgtcattttctgcatttcatgttaaacaga
tatacctagattgtaaaacaatacaaagaagaatctgaaaagaaagaagtaaactttgac
aatcagagggcggtagctttttatataacacacaaggcttattaccttccctgaagaatg
caatccaacattcattagcttttcttttttaaattaaaatctgtgagcaaatgaaacttt
gttctacatcaataaagcagattcaaagggatgcatactgggaagcactctgtaatctgt
ctatacaaagccaaaacatccagctgtaatatgaaaaaaatcacaaaataaTCAGGATGT
TTGGTCCATGA
Primer
(+)AGGTAACCCTAAAAGCGTGTT
(+)TCATGGACCAAACATCCTGA


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