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Mouse element [ mm390 ]


Position: chr5:20,455,841-20,456,804 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Rsbn1l(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
acCCAAGGAAGAATGATACCAAactgcacatggacagactctgcagcattttataactta
aatcttatatttaaccactgcaacatagagatttaaaatactaaccatctagaactccta
agcagaaggaaactaaatttcatcctcaaagcattcctaaggcaatgctccaactcccta
ggagagcgttacactgggaacaagggtacaccgaaccattagcttggcttagatgttagc
attcttttacattgtgaatgatgaacttttctattcagataatttttcaagatctaaggt
accattagatcagcaaggttactggcatttcaccagcattccaaaacagaacggaatact
tcacaacaatgtgtgacaatgacaacgtatatttatataacctcgtgatcacctaaagat
ctactttccaacccatatccactttgtattagtcagatctctacatatccacagatgact
agaatgacccctcattttaaagaaaatacggaaaactctgctagcttacattacaaaaga
aaactgaaaaacagttgggaattccccccccccaccccaccccacccccggcagaaacac
tctgaagccacttgatctggccaaaagacgtcaaaacatccgattttatcatttgctgaa
cgagaaagaaagaagaaaaaaaaaaaaaaagaatatggctgaaagcttctgaagggtagt
atttaaaacaggaccacgcaaaacactttaacaatatggaatgtgggcacctcagaaacc
gcacacttggtgccctgcgcacgacctcatctccctagtagggatgaaacatcctggtcc
ccgtggtccctgggagcttccagcttccgccaatacacccgaccacccactttttttttt
ttttttttttggacaggatattctggcgttggaagctgcgtcgcaAACATGAATTTCCTG
CGAT
Primer
(+)caCCAAGGAAGAATGATACCAA
(+)ATCGCAGGAAATTCATGTT


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