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Human element [ hs390 ]


Position: chr2:57,972,375-57,973,175 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: CCDC85A - VRK2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCAAGGGGTGAAGGGTATTTgagacaagccagggaagcaacatttcaaataggcttttaa
aattcacttgggtttgtactatatgtctcttgaaagagttagaagcccaatatataaaaa
gctgactatttatatatttgattccttaaaagcaatgaggaatacaaagcagatggtcca
gcattgtagatttcccttttcatattgcttaaacactagagatcaataagtctaatataa
acagatgatttccatagcagggtttataattagctggcactgaatgtgtccaaactctaa
aataattagcagaagcatgtggcacaccattaaaaccttgtggcttgtctgcatttacat
ttataattattaaagttaattatgatgcttgtgttatggttccaagctcctttacaactt
agattaaatatttttttaatcccataacttcatttctaaccttccttgagcctctggaaa
acagtgaaatcatacaaaataaggaatgtatagctgcagttttttgctccaaagggtact
agtctgtccttatcatgaaagataggctcttcttaaagagctggcagctttctcaactga
taacaatatttcgatcttgaattttaatttgtttgtaatgatgggacaggcagaataaca
ctgcttacaagtctttggagtgaaagctgtcatttttgagagctaaatgaatggcaagtt
agtgtcaatatagtctcctcaatttattatatagtgaaagagaatttaaaataatataca
tAATGGGCTTGGTTCAAGATC
Primer
(+)GCAAGGGGTGAAGGGTATTT
(+)GATCTTGAACCAAGCCCATT


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