Mouse element [ mm379 ]Position: chr4:89,105,875-89,113,247 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Cdkn2b - Dmrta1 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CACACTGGAGGATGCTGAAAgaatagtaaaatctaaattactgtttttacaatgaatgca ttctattggttgaaattaaacaacattggattttaaaatatcaactttctttttcacttg ttctgatgagtcaaaaataaaaatagagtcctcttaaaaagatcctgaacacccgtgagg gaggaaacccatgcagggcagtggggccagtatacaagctaagacacacacattgcactc tgtgtttccacattactgctccccattccacaccacacagcctttcctggaagagctgtc agaacaggatataatttgctgatattcttctaccagagaggaaggttgcataattagacc ttcaccatctgaatctaatcgaacatgaagcaccaccctcaggattaaagggaggggcga ctgatggggggagaatggatgggaaggaagaggaagttgatcccattagcacatggaatg gtagtctctgtagtttctgaatgacttatgacctgcagaaaatgtcctttactgtggctt gggatgggatgaaaggcacctcaactattgttatacttctgggtaaataaactctggaaa gaaagaatgcaaaatgttctgaatatagataggaatggaattatcactgttgtctcactc caagggaatactttcattccctaaaaaaagctttgaaatgaatgtagcattagatatgaa aaaataactttagacattgattactgtcacctccatccccccactaacagctatttctga taatttataataaattttcctcatacttaggtcaaaattctcttataatcacccatgaca tattcctctttagtcttagaccaattatcttaaaagtattaaatcgtctaatctttgtgt gccttaaatatattccggcagtactgagatggtgggaaagaaaaaaaagattgtaatatt taaattccaaggaagtttggcaatgatgactaaagtcctcaaagcaaagcgattcagcag cagcgtacacacacacacacacacacacacacacacacactcacacacactcacacacac accagattgttggagaaacaatgaaccctccaggaagatgtgccccatttaccttgggaa atcaccaagaaaatcataaatatatgtatatttgatttggattcaatgcctagcaaatgg tgattacagctccagactgtagaaacagagtgaacacatgatgtgattcggatgcatcag agcttgtgatttcctaatggatgaattggacactaactcttctgagtcacaaggattctt ttgccctggcagtgtggagctaagctagaaggtttatattaattgcctgtgacttggttg ggtgggttcctgctagtccatttaaggggagggacgtggagaacacattccttagaatgg ccacagactgtccagatgagaaggactctgaaacgtttatgtgacagtatcgaagggcta gagtggtcctagaagactggattgtatggtcactctctggtctcttagcttgagagtgag ggagacttaacaatgctttttgtttgttttacatctagcatactgacaggaaaacaacaa ccaaaaacaacccagtaatttaaaagggaaaatggtgtgaagagatactgatgcagaaaa ataaaacttttagctatttttttcctcaaaacctacccacatctccctctgagtttactt ttgttctcactttacagagtctttctgtggtaagggcaagggcgagagagagagagccag gagaggcttcactccttaaggtccctccagagtcatttctagatggttatcatcatgcca catgcacttggaattcttggtgattttccaagctaaacagggcacatcttcctggaggtt tcatttatttctccaacaatctgaaacgaaagttcttgtaaatgaagtcaaaccaagagg cttcatgccttggaacgcaaaattcattggaaatttaaaaaataaaaccctgggcttcag agatccaggcatttcagattcctgctcacattccctgctgagtgcctttcccctttcagt catgccttattacagaaagtgtgtacaggactatccaggcattagtgcggatatgacatt ctcttaaacttctggtctcttcctaagactggactagttagtccaggagattgttctgtt cttactattttacagccatctgagaatatcacaaaaccagataattctatgagaatcctc aatgcagtataagactaaaggcgatcagagtttcctcaagagcttcacgtaggtgtgatg actgtgggctgcttcttggacgccttattggacgcctgctattgagcagatgtttttctg gaaataggatgcagtggtgactagaacatttcctccgagtcaccaggagatggaggggga gagggttaggaaggatgaatatgaacgcaatgtgttcttctatttcttctttttgagata ggattttagtagccctggctagcctggaacttactatgtaggccaggctaacttccaact cacagagatccacctgtttttgcctcaggaatgctaggcttaaaggcaatgcaccaccat gctcaacacagtgaattgttgtttttccttttcattatttttctccatttatttaattat tcattcattcactttacatctctttcctctcagcatctgcctcacaagccccttcctctt cccctctccttctcctctgagaagggggagcccccctgggtaccaacccagcctggcaca tcaagtcattgcagagggtggccactttaggccccatattccctactgctaggagtttca tctagggtcacccccatagactcccaggagcctcctctatcctaggtctctggcatgtcc tagagattcgaacctcccatcccaccccatccccccacctgccttgagctcctgtcacag ttcattgataagcacaaagcattattctaggagttagaacatgccaccaaccatacccac tgcctttccatccattgcacccattccagggtcattctcttctttaggaatttctgtatt acagcttcagctgtagatagaaaggaggctgcccagcaccatccagtaaagcatctctta cagtctttgttggagcaacggttgttcccttttctaccatgttcaaaaaatctccgagtg tagcatcataaccaacttctgaggaactctgcagaattttctcagctatcaaagatcctt caccatctacattctttttttttaaaagatttatttatttatttttatttatgtgagtac actgtagctttcttcagacgcctgagaacagggcatcagaccccattacagatggttgtg agccatctgttgctgggaactaaacttaggacctctggaagagcagtatggtgttcttaa ctgctgagccacctctccagccccacctacattctttgcatagtcattgcaggaatgttg agtgctcctttagtaatttctatacctattttctgatttccattagcaggctttaatgaa tccaagactggcatgcactgaagcagaacacagccttctctgagaacaatgctttcttca acatctgctcttgtaacactgagagcatcagtagctctgtctttcttctcattcacttcc acaccacttgtccctccaactgaaaggaaataaaacttgagacctgtgattcatgtaata tatgtcaaaaagcccaaagagttgtttgtgaactttgaaaccaggggctaaaaacatagc acaacaggccaggacatgcccgggccggcccatcgttacctgtcctgactggcctggtac ctccctatctcccgcccttctgagagtctgttaatgtttaaatgaaccaatcatgtgaaa ccgtgccaattcctcctccagccccaccccttttctataaaagtccctagcttccaagcc tcagggttgaaaccactgtctcctgcgtgagatacgttttgaaccggagctccgccatta tggctccaccatgtggtcaacacctctgtctcctgcgggagatatgtgtcggcccggagc tctgtcattaaactacctcatgcttttacatcaaggtggtcgtctgttcgtgattcttgg gtgtgcgccgaacagaaattgagtgggggtttccccactaggttctttcactaccttcag cacagctcccccatttgcaagtttagcaagttactcgttcagcttttccttttcatattc actagttgtgatgcctagctgctcagtgatttcttgaatacgtttttcaatttgagtgtt gtcaccttttcctttcaaaatcagggtgccatctttgttaacaatgacctatccaacttt tcctacatcatgagcttgaacatcttcaagatttattcactccctcttccccaaaagcca aaccaccagtagcaatagccacatattttaagctgattctttctattgtccccaaacccc ggagctctgactgctacaacctgaagaccaacttttaccatgttcaaaaccatcgtgctt agagcttctccatcatcgtcttcaacaatgatgaccaaaggcttccaatgagcattggca gttttaagagcaggcacaatgtaacctggagactagaaattttcttttcactcaacagaa cataggcatctttggaatttacaattttgaccttttgatatattaataaaatatgggtaa atatatcctctatcaagtttcatttcagtaacttctaattcatcatccagggattttttt ccatccttccctgtgacgacaccctttcttccagcctttgtcattgcatcagaaatgatg ttgccaatgcttgtctccatttgcagaaatggaaggaacctgaccaattccttcaggggt tgtcccaggtttagattgttcttttaagcttagcaattacagcatcgacagccaccatca cacctctctgggtctccactggattagcctttttgctgatcctttcaaaggccttcttgg cagtagaacatgctagaacagtggcagtggtggtgccatccccagcctcttcctttgtgt tattggcaacatttagctctcatgcttttgtatttctcctgttaatcagttgactttgca acagtgacctccatccttggtgactttgagacttccccaactctgtccaataatcactgt tcttccctttggccccattgtaacagctagcacatctgctaacaggtctacattctgaag cgttaaggctcgaacatccacaccaaattttacatctttggcataggatccagtgagagg aagagccaggcgcgcaggactctggtctcatctggcaaaggactgtgggtaatcgaagca cttctgagaggcagtggtgggagcgcacatagtgaggcaggctttcagttgccagtgagg actaaatttggtttttgtatgttggaagttgaacctcatgcatgccaagcacatatagag ctcaggcttcactggtgttatatattatgacattctgctcatttataatgtagtccactt tagtctaaaacctagggaagtagtcacagagtttgaacagcccgttaaaatggcatttaa gtagacacaaagttaagtataccagtacagtgttcctttgatgtgggaattaaaaatggg gtgggagacttcacctggaaaatgaagactaagttcttggtgctatgagaaaagtaaaac agggaagacaaaaatggaaattgctcacccatttgcaagttacaggaagaggcaggttac agttcatagcatctctaatctcagggtgattggtctcagagaatgaaccacacaaatagg aaaaagcaaaacaaaacaacaacaacaacaaaaaccagggagtgactcagctctagctca ggttgcttctgcgcctggcatgacctctgctgttgtcctcggaccttgcttccctcctcc tctgtcgttgtggagaaacaggaaggaatgtttattaacaaggctggctggggccacacc caaagcaatatcagagttttacctctcctgggcctgggaagaggtccaaagatcaagggc agcttctggtttgtatgaggcaagagcaaacttagagaatatactgcttttttttttttt gagccttgacagatggtctgctgggtgtgatctcatctattcctcctggccatcctgagg cttgtaacaggtcaccagaaccgtaatccccaaggagctttgcccaagatgatggaagag caatggttcactctcagggttgtgtctccgtggcagatgtctttcactgcggggttagca ccccagctgggatcctcaggtcccttatcaacagcctttcccattttatcttccagtcca atcttgtactcgtatcttacgggctccagtaatgggtcacaccttatgtgcttgagaggg gaggggagaaggttgagcagagaggaagtaaagagataaggggacaggagacagagatac acagagacacagagacacacagcgagaaatagaaacagagagaggggaacagagagagac aaaggcagagagtcaaagacagagagagacagtgagcaaaggagatttcttttaagatat ttttagtatgtttcctgcctcaccgagtagggaggagggatacaatttttttttattgct ctgaagggtataaaccattccaacgggtgccaccctgtgtgaaaatttcagagatgccaa taagccacttgagacagtaaggctcgtgcctttctgttctcattccttatcagtctctga cttgcagaggaggaatgctggggtgggggggtggtggggggaagaaagaacttcaaggtt ttaagagggtggatttgtgcccctgaaataaattggtacaagtccttgcttaggctgttt ctccacctttccttcttaatagctacacacgtcacagtcagacccttgtatcagaacagt gaaacttgatcccctaaatccaggcatcctaggacatagcagttccacctgtgtggtctg tgacccagcagcaagcaactgtccttgaaattaaccagtatggccaccagtcctgtgcct attttcatcacagcagctgattaatatagaactgcttaaatgggtcagggaattcatgaa aatgatttgtttaaacaattgtcacttattggcacttaccgagactatggctgccttcca gaggcaatcagagaaacctgaggacgtgccagcATTGGAGTGTAGCCACTGGGPrimer
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