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Mouse element [ mm370 ]


Position: chr5:120,271,992-120,274,249 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC433944 - Tbx5

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCCCAGAGTCTGCCATAAACatctgataatttaagatccagggaacagattcagagtccc
tgcctccgaaggtctgtccccataggaagagggcctgagtcagtggttagttttggctat
taagtgctgattgggatagaggcaaaggctgcagcagagggcagctggggccctgataac
aaagtagcaaagatcagttatccccccccaccaccaccactttggagctggggccagggt
gtctggggccttgagcaactctggccttctcctgctctcaatagcatctccttctctaga
agcctgtgtcagaggactcgtaacttcttgtcaattttagttattggcactcgtttcttc
cccaggggactaggggcacactggcctgtggaattcttctttcacctccattttgcctct
gaggttctgaggtctttgacaatatgtttccagagccctgattatgcacaagtcttatcc
ttttggggggggtttgcttttgtttgtttgtttgttttctctccttttacaactgcccat
tgaggagtgagaatcattgcacagagcaagatacagaaacggaaaggctgggcatacaca
actagggaagtggcagagtggaagtttgaacctacagccacatccaagagcttcattctg
caacctggcttcccaccccagtaacctctctccgtacccaggcccactgtgccttagaga
gagagagagagagagacaggctacagttgagctgagcccagaaaaaaaaaacctctttgc
tctccagcttttaaatctctgtgctcagcaagatcccagctctccttccctactccctcc
actgcttcaagcccccacccagtgagaccaaaaggtcagagcgtgggtgatatgaagggc
ccggccagcaaaagcagctagaagctcaatattttctaccagctacggggcaacaccctg
gatgtataaatgcttgattttattttattgttattatggctcagggtccagtatgggcca
taaatgaatttaagagacttcggagtacagaatttaatatagctggtgtcattaaagaaa
aatggtacagagaacctgtggggacagacagacccccacccccatccctgtctctccctc
gccatctcctgtcacctgccacctttcgggagtgaaggaaggctgggggtagggtaagtc
ctccatggggggagcaggaggggactgagccaaagtgagctgaggactcccagggacagg
gcagggtgggggcgggggtcacccttcccaggatgcctgctgcttcagtgagtaaatagt
caagtagggacacttagggggcgggcatgagacagaactttctagataaggagagggctt
atcagcctataaaaataccactttcacctatcagctgccttcttctcctgggaagagaca
gagggtggaagaaaggagccagagatgagggatggaagggagagaaatacaggactggtg
agagccacacaggcacagagaaacagagagagggatctttgggtgttccctccttcatat
atatatctttatcttttgctccaagcttcccatcattctgactgctgttttgttttgttt
attgtaaggaaggagagagtgttacaaccccgtacattactgattcgttcattatatctt
atctgagagcatctcacattccctggtctgagtccatctgccatatcggcatgatatatt
tgattgcacgtgtatttttaccttatgtgaaaagtacggtaaacaaataaactcaaacgg
cgggaacagcagcaatgaacaacagaacagttgccaggcagagagaaaggacagaggcac
cacctgtgtaaagtcctgggggaaggaaaagaaggtgcagggatggggaacagaaagggg
gctgggtgggaggtgggaccaacagacaggagccagcacaaccttcaggatgtgtggagg
tggaatttcatggaagaccttcagatgccttttggagggccatatgcagggacatgacaa
tcatgtggcatcttttgatagtacctaaacagtcagctcagagatccctggaggagctgg
cggggatgatgggtggaggagtgatcaggtgttccctgaggagtcactgtggtgtggctt
gtacaggggtcagaggatgctggcctcagcctcaggtaggctcttaaaaccgggtcctct
atatgcctatccctccttGAGCAGAATCAAGGACTCCG
Primer
(+)CCCCAGAGTCTGCCATAAAC
(+)CGGAGTCCTTGATTCTGCTC


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