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Human element [ hs366 ]


Position: chr1:215,888,921-215,890,374 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: USH2A(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGGGACAGTGCTCTTGACATttcagagataatgaagagagttttcaagacactttctatt
tccatacgagttcctttgtatgctgggttgcctgccattatgtttatgtaattctgacag
tgttcttaatgacacactaacagattgtaaaacacgctgctggcatttacttgtttttta
tatttttaaaacaatgtccttcatgtaacagtagttaagcgcggcagaaggacatcatta
gagccatggttaaactgtaatttacaccattaggaaggcaggagcaatttttattgcctg
gcaattttcttgctgaaatatttggaccatatggctcaatttgtgtaataaccttaattt
ctgcacccttcaggtcttcctccatctcctacggaatggtaaaatgcggtttagcagaaa
aggcaactgtctatacttagagagttgagattaataacatgtcacgtcctgtttttggtg
aaggaattcgaacagcagccagatggtatctctacaaataactgtcaggggtcttgatct
aatcaatacaatgtattaatacgtctccctttgctgtttctctaggggctggtgcagaac
atctggaaagagtggaaggggggcgggggggcccgccaagtagaaagccgattcttttca
gaatcaaactgagcccaattaatttttcatgtatccttgataactgtttcataatgagct
atgcgtcttgacggatttggggttggcagagcaggctgcccctgctttctatccccattc
agtccacttatagaaaccaacccattaatcaagctatctggcataaaacctgaatctcag
ctcagcaagagatcaataaccatcctaaaaaaacacagaaccagccactaatgggcacag
gtatccagccatgacattagtaattgctttagcaaaaataaaactctgtatcataatcac
ccaataggaatttgtacgataaaattcactacttgtgtcttgtcaaaaagtaacatgtac
atccgttaaaaatatactgtaattttactatctagacatgaccattatctttcagtgtta
gacaacccacccttttgaatggattaaaattctctgattttgtaatgtgaatatttaata
attcaagtatcatataaaatgtttaaaaatgagttattacacttattttaaattcagagt
acctaagggggtccttaatacaatctttagcctggctgtatatgacacatggtgagcctg
ctgtgctaagaactctgatgtgctgtcagattggtcagattttgttactctttggttggc
ttaatggcaagatttacaattcaattcataaatttttatcactttcccaagtggtatgtt
tttgtctcaaaccttcactcttttaccaaattcaagccagttacattactttccAGTGGG
CAAATGTCTTCTGG
Primer
(+)GGGGACAGTGCTCTTGACAT
(+)CCAGAAGACATTTGCCCACT


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