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Human element [ hs364 ]


Position: chr17:35,336,093-35,337,226 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AATF(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACTGGTAACGCCATTCTGCTTGGGGAATATAGAACAAGCCCAAACAGTAA
TACTGACAGAATTCGGAATTATGATACAGTGGAGCCTTCACGCAATTCTT
TGTTGAAGAAGTTAGGGCCTAAATGTTAAGGCTTATTGTTATTCTGAGTT
GATAATCTCTGCCTTGCTTTAATAATTTTTCCTCATGCCTGGGTAGCCCG
CGAGTTGCACAATAATCACTCACACAGCTTTGTAATCAATGCCCAAAGTA
ATAGGATTCCTCTGGCCACCGGCAATTAATAAATTTGTGTCTTTTTTAAA
ACACTAGCAAGTCGGGCCTGAAATACGACTGACTGGCTCTCCTCATTTGC
ATATTTATTGCAGTGGAAAAATTCTTACCAGATGATTGATGCTGAGCCTG
CCTCTTGAATTCCAAGCAGCACATTATTATGAAATGAAAAATGCCGGCCA
TACAGTTGATTAAAGTTGAAGACAGTGGAATCGGTGTTTTTTAAGATTGT
GGGAGAATTAAAGGCATATTTTAATAGATGTTGACAAGAAGTGAACTAAC
AAAAGCAAAGCAAAGGATTTGCTTGAAAAGATTTAATCAAACGTCTTTCT
TGGGGGATTAATTGCTGGGGATGACTAGTGCAAGTGGCAGGCTTGTGTGG
ATTTGAATGAAAAGTATTGTTCTCAGGCCAATATATCGTGTGTCATTTTG
ACCTATAGTTTAGCTCTAGTTCTAGAGTTACTTTTGAAGGAGAAAAAAAT
GCTCTTGTAATCTGTAAATTCCAATTCAATGTATTTATCTGGGGTAATAT
GAATGGGGGAGTTTATGTGTACTTGTACATAAATAATTGTAATGTTTGCG
TATTTATTTAAAAACAACTGTATAGATATTTAAAAACTGATAAGCTTTAT
TTACTTTATACACTCACTCTTCCTGTTCTCGCTTCACGCCATTGCCAGAA
ATTGTACTTACTGGTTTATAATCTAATTAATGAACTGTGTGTCCATGCCC
AAACTTATTCCTCGCTTACAGTTTTGTTTATGTTGGACAGCCTAGATGAA
TCAGGGAAAAAAATAAAGCTGTTAGGTGAAAATGGTTTTTAGATTGGTGA
CATTTTATATATAGAATGCTTGCATATGGGTAGC
Primer
(+)ACTGGTAACGCCATTCTGCT
(+)GCTACCCATATGCAAGCATTC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.