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Mouse element [ mm343 ]


Position: chr2:166,178,365-166,180,321 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm11468 - 5031425F14Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
acttTTCGTACTCGCATGATCCAGgacccagtgtttagacaatatttctttatttataca
agaaatgaagttaaaacatacacaaagctaggcaggtccttctctgtctgcagagttcct
gtggtgtgaagaagagtttcctcctgctggctcaggctccttccgtcaggtagagtgagt
gaggacacaaggcccgggtgggcaacaacacggctgagcagagaaaggctgagtgcaaaa
gagcgggaggcctgggcagtgcaaggtcagatccagtccagcagtcaggcagggctgcgg
cctgcacacatccagtagctcctgatagcattgtgtacagtcctcgatacgctgatttct
ctttgttatcatagatgggtccaagacagggacagagcaaggtacacctaggggaatgag
aggacagagtggaacagactgaaagataggagaggggggaggtgagggaagatgcagttc
tagggagcaaggaaaagcagaggaaagtgggggcaggacacaggctgcaggagtggggga
ggagttaggacccagccactgaggtctctagagttcaaggctggcaaggattcatatccc
cagagtgttctagcagctgttcagccaggtgacagtaatgatgggctccaactgccagac
tactggaccccacgtgatacacacatgtcacccagggcctctgtgtcccctgtatacagt
tcactgtgcccacccaagagacatgaggcctggcactgtggagtcagagccaatggccct
ccccaggaagcgagaggggccagatgtgcttttgtggtctccatggagacctgccaacta
ggcgtcctccaagggcagaggcctcagagcttcagtttttgccaggcttttgatagaatg
cacacattttaagcagatctgccaggcacgtgacaggccaaggcatccctcccagctaca
ggggcccagatgaccagcgcacccagagcacggacagccagccgcatggctgcctcgata
gcagtgagcatcacatgtgcagcttttgggttttgctcagctccacctgccattgttaaa
gcaagccctgccagctctgcttccagcaggaaggccccttggctctgtcctgggcgagag
gaagagtaatgacctcgatgtggcttgagcaggaaacaaagccatctgagcgggagcaaa
ggatgactcagagactacgaggctatttatttgttcagccagcaaaccccaaaccttctt
agatccaaaccgtgagcagtcagggcacggtccctcctctagggggtcggatgctaagca
catcaacagatgacagtgatgactcccagttgaggagacacagagaccgaaggttagaga
atggcgaggatagggtggggcatgaagaaaagcagttctaagcagtagacacgtgagaca
gaagctgaatgaagaagaggagccaaatgagaggacagggaagagggacccagggggaag
gaacagccaggacaaaggctcagagcctcccaactgctggtacccacttggcccatgaag
atggaggatgtctccatccctcagaagggctcctccctttttcttcaagggttggtgaag
ggtgagtgccacaggttccctctcatactaactcatctgccagccttcaaagagaacctc
taaaatcccagagcagcagctcctaaggccagcaagttcccagcgtcagcctccattgca
caaccaaagctgttccccacacccttgtctcctcacaccagttttacaccaagccacaca
caaagtgacaccagctaggacgtcgctgcccatctccaggttctgcagacagttactaaa
ataacaactgtgtatctggagaacaccccaaaacacccacagagggtcttttgggaaacg
gctatcccggctcagccCCTGAGCCGATGCATCTCTA
Primer
(+)CACCTTCGTACTCGCATGATCCAG
(+)TAGAGATGCATCGGCTCAGG


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