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Mouse element [ mm336 ]


Position: chr12:88,151,548-88,154,251 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm6772 - 6430527G18Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gggaAATGTGTGCCCCATTACCTCtacagagaacaacaatgaacagccctgaggaatatc
tgacatctgtgagggctaaataagcccacgacgccctcagcggttctgcctgattctaat
gatgctttaaaaaactactcagttccacctcccccaccttccaaattctgctttgctctc
agcccctgccgcaaggctcagcttcatgcagtttgcagcacaccacacaccacttctatt
ctggttgctcctttattcttgcccttgcttctgtgcccttccatcagctttgaacatgtc
cttcctgtctgagctcatctgccagctccgttcaccgtctcagactcctccctcttcctg
tcaaggccttccacgatcactgtcagcctgtccttctcaagggcctgccacgtcagctca
cctgcctcctgcaggagtgctgccctcctcttccctcctgcttttagacagtgcctgact
gagttaggcatgccctcagcctactctgcaagccttgggttctttgaagtgggaaggaag
tgatgggttcctaagactgccataacaaactgtcacacacacgctgggaggctggagcag
gcatttacgctctggaagctgcaagcctgacatcaaggttctggcaaagccacactcaac
ttgcgacttgctggatctagagaggaagcccttcctcttctgtcctcctcctccctctcc
cctctccctcttccctctgatggctgccagcagcaggcctaggcctttgctcgacttatt
ccaaacgcatgtctcccctgctccttctatgattctgtgttgagagttccgtgttggtat
gagagcatccatttttgtactaggggccagtctgatccactgtggccccagcttcaccta
atttctcctgcaaaggctttgcttcctaataaagacgacaattccaacttccaagtggac
aggagcactgcttgacccatgaaattatgtgtccctcaaatttgctttgcttgcttgttt
ttcccccatggacctggagattgaacacagggtcttatgtgcacttgacaagcactctgc
cctgtagcaacgcccctagaccttcctctcctccccaccccttcacccacccaagatagg
ctttctctgcgtagccctggctgtcctggaactcactctataggtcaggctggcctcaat
ctcagagatctgcctgtctctgcctctgcttcctgagtactgggattaaagccatgcaat
accagcacccctctcctggctggcttcttagccagctgtctgccaactctggtctccact
gtgcaaacacacacctcgctctattgtttgagtgtggcctggtgcagtcaagtcttcaga
ggaacagagcacatgggactgcatatagcactgtctcattcttcaccaagctgtgctacg
catacacatgcagcgacatgcatacacacacgtttgcacacactccggtgcacagtcata
gaggcatgcacacactcaggggcacacagttacacacacacacacacacacaccggtgca
tattcaaaactgctaagccctgtcaagcaaggccaccagagctatcggcaagcccctagc
tctcccctgtgcctcagccttaacagctgcaactctgccatgcctggcccttccttacct
gcatagctgtggcttctccctggggcccatcatctctaggacacagtccccaccctcaca
accttccagactaagtcaggaggccattttccattttctgcaggcctgtcttacctttgc
cttctacacattctggggaactactccagaaccagggctgtgttccttctgtgagcctgg
aggtccgcccccccccccccacccagaatactgtcagtacagcaacgaatgaagaatatg
tggacaagtgacatttacctactagaccctcgggcactcttttgatctgaatttccttac
ttgctactggacttggcacccagagggactcactgggaccctctgcctcctgcctggtcc
cagtcactatgcttcctcaaacagcctccatcatgctgtcaccccatctctgtattctct
attgttccctcgcttaggccagtcactgagctgcctctctgagctagcctttgcttctga
attaggtttgtgtatctgctgtttgggggtgttgccatgaactgagttccacgggaaagc
agctccagccccctgagagacagcattctatctgtgccatcccacctcccagagcgacac
cccaggggcacccatgggagtttgctgggagcacccacttgtgcaacgcccctcagggct
cattgctggcagcagaggagctagctggtgggaggagaaagtctctctcctgaggcattc
ctatgagaaagtgttctcaaagtggcaacagcagtggcaacagcccaaaggcacatgtgc
aggcaaagagaaaggatttcagatagcctgggcctgtggagactcaggaaccaaaactaa
taggctccctcccacccaagtgacagaattacccacagctaagggctcagaactttgctc
tgatccattcttcacctggcccctttttctggtggctttgaaggccagacattacctgtc
tgtccacactcctaaggaacagcttcagaggctgtgtctagcacCTCTCCCACATGGAAG
CATC
Primer
(+)CACCAATGTGTGCCCCATTACCTC
(+)GATGCTTCCATGTGGGAGAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.