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Mouse element [ mm335 ]


Position: chr8:123,806,947-123,808,321 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Foxl1 - 1700018B08Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
acagGTGTCCCCTGCACAGTCTCTcacacaccctcttgttgccttccatgagagtatgac
acacacacactcacacagacaacaaaggcctctgtctctagcttgccttgggggtttccc
ctaattccctagaactttcccatttatttcctgtccttgggaaagggaactttttaaatc
cttttggggtttctcattaagaccctgacaaatgagagccagagaggcctgaaacccacc
acatcaccaaatatgggctaagaatgcaccccacccccacctcccataagtcatagccac
aggcctacctatggcctacaggctgctcctcgggctggcctcgcccagatcccaacaaat
actaaattggccagcgtggccacacaggcatcccggtgaaacccaagaagccaatgggtt
aacccttcaaaacaatgcccagctttcttccaagtcgccagcctgtcccaggcgccctgc
ctgggcctgattgacaaggcccttgggagccacagggtgaggccccgtcaggcacttgcc
ttttctggggcttagaggccccaacagatcatctggatagggcagtggggactcatcttt
cagcctcccctgtcagaattcctgcctcctccttgagacaccagcaaaggggccaggagg
aagatggtccatccagctgtgtggccagccatgcggtcacccttacgaccagtctgtgtc
ttttgttcggcacacagcacctgggatgccccacacggtcctgtcaacagtgcctgatga
tggaaatctgggtctgagcagcacgtcaggggcttggcccgctcactgcttggggtgtgg
ctatcttccctgcaatagcctctgctggcctgacacgcctgaggtgagcgatgacccaga
gcaccaagcagtgccaggctggtgtcagctctgtctcactgcatttggggaaactgaggc
tagaggcatggagcagcgttctgggacgtgagtctagtctgcctcagaactgtagattcc
accccagcttcaacccctaagaagtgtcaggggtcttcccagcagccatggggcctgggc
tctatctagaaccttccaagggtctagaaagggatggagggaaaccgtgtctaaaagact
cttggtttattccttttgcctagccgctttaggccaactgcctgctttcttatctttagt
cgcatgtacctgctaactgctgggccgcctgtttgccctgatgcccagtgcgcagagtcc
ttctccagcctctgagccaatcacagccactgttacagctgaccttttcaactgctacat
tttcaacgaggcagagttgttcttcggtgaaggtcGGATCTGCTTGGAACCAGAA
Primer
(+)CACCGTGTCCCCTGCACAGTCTCT
(+)TTCTGGTTCCAAGCAGATCC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.