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Mouse element [ mm330 ]


Position: chr4:107,274,653-107,277,218 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Glis1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tgaaGCCCTAAAAATGACTCAGGTGctgtatacaccacaacacagcacagaggggtctta
gaaacacgaagctaagctaaagaagctgggcataaaacctacatgcggtgtgattcaact
tacatgtcaacaaagaaaataaagggccaatctacaggaacagagagtctggctgctgca
gtttctggggactcgagagagagagagaaacaaggagtgagtgacagccagtggcacagg
gtttctttgggtgaaaatgttctacaaaccattgtggtgatggttgcccaggcgtgaata
ggcttgacacccaccgaattatatgctttaagtggtgggttttatggttgtgtgtgtttc
ttctctgaagagctattgaaacgcgtcactgaagcctctgggtgaccgcagggaaacaca
ccctgtgtatctggcctcaagcttgacctttgtggcttggcttcacagggcaggggccaa
ggcagctcagcagcttctgagatggtgcaagggctgccctcaagcccaggcccagggctg
tggccacaacacaagatagaacgtcagagtggcataagtttgggttctgaaagatcattt
atgacagttttatgtggggaccggggtgagagtggcctcagtgccctgagctcttcctgg
gtgtgatgagccctatttctgatgagaaatggcagcctcgtgccctggtggtctctgatg
actggcgtgagcagagaggcacaagcaatactcagtcctggcctacacctgcgtcatcag
gtttgtgttccgtgactcagtcctcccggcggcagtgatcgctgccgtggcaattagcca
gtgtgtcctaagatcgtggcctcaccattctgcaggtccccgctgaaagccttgctggtt
ttaggggtgctgagtgtgttgtaggagctttgccaagccagaccggatagtgggagggaa
gcaggctcacagacgtgactaactactgtgtcctgactcagaagaacccgtgcagtagag
gagcggagtccaaggccagagcgccatctagcactgtgaccatgacagaagggacaaccc
tgacagcatccactactgcctctactacctgtcacccttatccagctggacgctgttgtt
ggaggagagagaacggggccggcagtctgagcacagggctggaagatgaggtcaggcagc
cataaccaatctgatgctcagcctagggcctgtctttgttgtttgtgtctgtggtggtaa
agcaaagagccttctccttccccagcagtgggatgggacaagaaggctcaccctgacgga
ctggtttgttgccatcagcaggccgtccgggaacacctgcagtgcatctggtccattgcc
aggtcaaggccaaggctgccccgtgtctgaatctcttcctgaagcagcaagaatgagcac
agagtctggaagttactgtgctgagtgtgaggctgtgatggagggaggagcacagctagg
aagcctaaggaatcgaggagcatctgaaaggggtggcgatgagctggagtagcccggtga
cggggacggggcattccgagtggatgatggtgggagggggcacatgggtcctggctgcct
ggagcagaccaccctttactgctcctgccgccctgatcttgttttagtccttacactaaa
tctactgcagggagggccatgtcacctctgctgcaggacaggggtcaggtgacatgctca
aaacctgagccagtaaacatcagagctgggacttgaacttagcctagcccaggccccacc
cgggtgcctcgggaatgcgctccagtgtttgaggttgatgggtgttgagggtgcgtttgc
cccttcccagggctacggggctacggtatagccactgccctcctcgtctgtcatcaccgt
ttaatgaaacctgccactctgtctccctgatgcctctgtcatcactggccgccatgtgtg
acacaggatcccagtgagctcatccttgcgagccaggcatccatgaccttcattcattca
gttcatccagggagtaacttacgggtccccagtataggcctgcggctgccagcaccagga
gctccgtcccaagccgtttgcccatcgtttccctaagcgtcagctcctcctggaagtcac
cacgctgtcctcgtgtttttatgaaaaactttagtggaagaccccgtgcccctgtcacat
aggagtgagtgtcccatccagacatgactcagaccttcctaccgacacaaggagaatagg
cacgtcctgtaacccagggttacgtgctgaactaagagacaggtctagaattgcaacttc
aaacaatccataaagggcttcactgaccactagctttttacagcagagcgtagtatgaaa
tgggagacagtgagaagaaagtttgaagaaagtagagcatggcgagggaaaggtcacccc
taaggataccactcacacgtcacccctaaggacaccactcacacttgaccactgtgatca
ttttggaggggtttccaggccTTTCTCTGTCATGTGATAAATGCTC
Primer
(+)CACCGCCCTAAAAATGACTCAGGTG
(+)GAGCATTTATCACATGACAGAGAAA


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