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Mouse element [ mm325 ]


Position: chr15:85,336,360-85,340,036 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 7530416G11Rik - Wnt7b

Timepoints:
e11.5

Published in He et al. (2017) PNAS 114:E1633-40.

Expression Pattern
eye (5 out of 10 embryos) 
forebrain (7 out of 10 embryos) 
hindbrain (rhombencephalon) (8 out of 10 embryos) 
midbrain (mesencephalon) (8 out of 10 embryos) 
neural tube (8 out of 10 embryos) 

Embryo 1



Embryo 2



Embryo 3


Embryo 5

Fasta sequence
gcCCCGTTCTGACCAAGGATAGatgacgccaaccctggctgttgtccaggtacctccccg
tggtcaagcaccgactccagcatgagccgtaggtcccggtacaaactctgcgttgagggt
caggttgagtgtcctggctggagaaaggggagacctaagggtcacttgaaagcaagatgt
caggatggctcactagcactgtggtgtggtactctgggggaggtcgctctgtgcctcagt
ttccctgggtgtaactgtcacagaactcactggaaatagctttatgaatgagacaaataa
ttatggtatatgaacaggctgccccaggcctggtaggtcaagcccttgtccccagggcca
acttttctgatgtgtagactgttccatcccagtgtccttcttcccccatctgagaatcag
ccttcctttatgttcatcttggaatccctggtcacctgtggataccatcacaaccatatt
agttaatattgagtcttaggatatacacagaagccacctcccatgccaccctggctaggc
tcagtcactgtcatgccagcctagtcttaaggcaattacaagcaaggcctaaatacagac
tgagcagactccccctacacacacacacacacacacacacacacacacacacctctgctt
acactggacccctggtggttttcctaaccacctagccccgccccagcaatgtctcctgag
gtaaagggtgtggtctgacagggtgatctctagatctctgagctccatgaggaatcagct
ctctcatgttgctgctttctgacactggcccaaggctttctgttagcgagaatttcctgt
ctgttgttcctctttcatggacctcaggtacaggcccaggggacacttgcctggtgctgc
atctctgaccctcagataaccccagcacatgcctgacatacccaggagtcagctggacct
cctgcctggcctagcccagatggcaagctggctcccctcagaaacccctttctatccttg
gtgtctccccttccctccctcagccctgaccttccctgtttctcagacctcatgctgacc
cctcaggatggtcagagcagaggcaacttgaaggaggcctggccccagactcagcctgca
gtggtttttttttgtttgtttgtttgtttttctcacctttttctgaagcagtgctgggac
ccaagtacaggctttctctgagtgaccagagctagggactccagctccaaccctagctcc
tgcttggtgtcatgtggcccctgaagatagttggcaccctcctaccctctttaccctatc
tgagctctgcctgcacacacacacacacacacacacacacacacacacacaccagtgata
tagcccctgctgtctggactctcttatgggtgtatctggtcatcaggttagggaggtttt
tgcccaccagcatggtgacaccagctagagatctgtgcctggatggcagccatgtgctat
cccagttgatgctgatagtgaaggtccctttgagtcctctgctgggaatggtcaccctga
cgacagatgggactctgaggtgtgtgtgcccagggcagagggcctatggacatgtctgtt
ctgtcgcagtttgtcccccctcctgaccggatgctctggtggggtccctcggccttctcg
tgggccgtgactaaatcagagccccctggcccgccccaccgacgcggctttgtgtgccag
gcctttctttctctgccgaccatggaaaaggccgcgtcagcgtccgctttgtctgccctg
tccgccgccgctgttctcagggcggacaaagcccgggtcgttcacaaccgcccgggcgga
cggagcgattcactgtttggataattcgaccacaaaacccatgtggccctttcgcctcca
tcagctggactgggcaccccgccccctatggcttttcagggctctcaggagagaaaattc
ccacaggccccggggcaggcacagccctggacaaacagcagctcaggcctgagacagcgc
tgagtctcacggcagcctggggccagacacccagcccagcagcagccaggtacctgctac
agagaccaggatcttgggtcctggaagtttctcctaacaggttcctgttggtccacgctg
cctctctcctgcaatttcattttccacaaacattttggctaaacagtgtcatgtatccca
gaatggccagagacccaaggatgcttttacagctcaaaaacagagctttcttcctcccac
ttgactccactgagggctgggactgtgcgatggtgccggggtcattagctactgcacctc
catagatacgcacctgctacggcttcgagggctagagctgcccttatcctcaaggaccct
ttgggcctgtgtacaatcactggctgaagccagcctttgtgggcaatttgcctctcttct
cttgactctgatacccctgtacctcctcccagtctgcagcctcctctctccctggctcag
cccaaatcctgcctctgccatgccccctccccacacccttggtccacccaccagccaatc
ccctaggctcaccatgatctgtttagaattgaaactgctaccccagggtcccagccactt
tctctcttcctccctggtgccccagggcacccctcccctccctaggctctgctgtgggca
gatttcacactgctgtgcccctggcctggcctcatctgtccacaaccacttcttggaatg
tggcttggggatccatacagagtcctgccataaaatgtgccaatggtgagccatgtgaca
acagggaaggtctctcaacacacaacaaccaaaacttgattccaaatcaaacacataatg
gattcaaggtgcttctgttggtgtctgcagagcttcgctgcagagctgactgcagccttc
cttctgaacacaccacatggcatggcccctttgcactatgcatgtcacttggctgtgcta
tgccagcaaatactgcttgagacaccctggttagagagtccagactcttgtatgttaaga
actgtggtgtcatgccgggcgtggtggcacatgcctttaatctcagcactcgggaggcag
aggcaagcggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagc
cggggctatacagagaaaccctgtctcgaaaaaacaaaacaaaacaaaataaaataaaac
aaaacaaaacaaaacaaaaaacaaaaccaagaactgtggtgtctgtgggctggagagatg
gctcagcagttaagagcactgactgctcttctgaaagtcctaagttcaaatcccagcagc
aacatggtggttcacaaccacccgtaatgagatcttatgccctcttctggggtgtctgaa
gacagctacagtgagctgggccagaacaagcagggccgggtgagagctagagagctgggt
cagcggttaagagcactgactgttcttctggtcctgagttcaaatcccaggaaccacatg
gtggctcacctatctgtaatgagatctgatgcactcttcaagggtgtctgaagacagcta
cagtgtacttagatataataaataaatctgagagagagagaaagtatcttactGCCTACG
AGAGGTTTTAATTGTTT
Primer
(+)CACCCGTTCTGACCAAGGATAG
(+)AAACAATTAAAACCTCTCGTAGGC


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