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Mouse element [ mm320 ]


Position: chr2:30,509,784-30,511,968 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cstad - Mir3089

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tgCCTCCTGAAGCGAAGAGGAGTTtctggcaagagtctgtgctcataaatatggatggga
catagaaaagagtgaacgctactgctgccaccaccgttagtgctcccggaagctgaagga
aggtggcggtggcagcgggacctaaagcaattgtatttaataagcaaaaaacaactgccg
cctaacctggcctgtcttctgccaaagagcaaagaccaggggcttctgctgctatggtta
ccaagcacagctgtgccaaagaaaggcaaggccagccaggcataggagatgtggtgatgg
agcccaatggagtccatcaaaagcaaagatgacttcaccttgtctccactgagcccagat
gtaaacgcaggagggaagtacggtcaatcaaatggtccattttccctttgcacttctgga
ggaccaggctggcagatcaccaggctctaccctcagggtagctgctggcagctgggagga
gccaaggacaggcactgcagtgtgtaaaaacagcaagggatcacacgtgaccatgaccaa
ccagaggaggcaggtaggagggagggatgggaaggtggccgtgttaccaccctcctccct
ctcctctgccctgactccctgccacctggcctgaccagcgccaacttctgccctctgcag
cctggacaagagtccatacaagcaggtttcaacccgaggccaggagagcagaggctgcca
ggagccttacagctggcaagtgagctctgaggagaaggcatggccccacccttacccttc
agtacagtctcgctgacctccagagagctgtgggcatcgaccactgcaccccacatagca
tttgtaggaacttggggtccacagccaagacaatctgcaaatccctgtggctctcatcct
cagggcctcaaggatccaatatcgctgaactggcaagaatggtggccctgtggaggaccc
agtcctgacgctggcacttcaggagccttatttggaagtaagtctttccagagttaaaat
gagtcactctggtaggtcccaaccaagaccactgtcctcatacatatgggagtattggac
acaggggtggaccttcccaaagggaggaggtggtgaagacacaagcaacaggcagccctg
tccatgtagatggaggacatcatcgagagctagagcaaggagcaaggcctgggaccatcc
tgctggggcctccacttggtcatggtttctagaattagctctagaaaactaaaataacca
cgcaagcattaccatcaccgtcgcaaacaccttcattaatatcaccaccacaacacccac
cgccaccaggacaccagcattcacaccaccatcactcaccaccatcatcaccatcatagc
tgtcaccccaccatcactgcccaccactatcatcatcatcacaaccatcatgatcaccac
caccaccatcaccatgcggccatcagcccatccccacaccccaccaccatctccggattg
gtgttaggctttgtggatttaacagcacacatgtcctcgcagctctggaggctggacatg
ggcaatgggtgtcaggagagctgtgctccctcttcaggctttggagaggggctttctttg
ctgcctctggtatgtgagggcttcgggtgctcagtggcttgtggctctgtgtcacttccc
tctctgcctgagtctgaatttgctcttgttcccccatgtatttattttttgtgtgcacac
atcacagcgcttgtggacgtgtgcagaagtcagatggcagtctgtgggagtcatctctcc
ctttctgccatgtgtgtcccaggtgaaacatggcttgccagtcttggtggccagctacct
cacctactgagtcatctcactggcccatctcctttcatctgacattgattttattttatg
tgtgagtgttttccttgtatgcatgtgtgtgtgtgtgtgtgtgtgtgtggtgcccagaga
gctcagaagagggtatcagataccctgagactggacttaacagcaggttgtgaatctcca
aggcggggctgggactcacatcctggtgctgtgcatgaacagccagtgctctaaactgct
gagccatctccagccagcatcccgtttcttacaaagacatttgcgatggcatttaggccc
cacctGGCTAATTCAGGATGCTCCA
Primer
(+)CACCTCCTGAAGCGAAGAGGAGTT
(+)TGGAGCATCCTGAATTAGCC


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