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Mouse element [ mm316 ]


Position: chr4:141,092,676-141,093,774 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Spen(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGCTATCTTCTCCACGCTGAggacctgctactagagggcagagacccgagccgaggggtg
gagcagcacgggcagagaaagttcccatctgctggcgctccagctgctgcagtccccttt
catccccgggcaccccggccaacactccatctccggacctccccctctcccgtgtctcag
acacaacgtagtaaacacccggagtcccaggcagcgcgcacctcccccaggcctgcggag
gacatcccggcaggttatgaatggcctcactatacccagctccttttcacacgcgggcac
gcgcacacgcgcgccccggaggcgaagatttaatacccccggtcagagcaacggccaaca
gaatcaatggccctccatcagagagagagaaaggaaggcgctcacgcttcccaggcctca
ccaaagaggttctagaccgggcgacacaacccattttcccaggttgactctaatgtgagg
acgttccttctcctaattatattccctgcaccgactggatagtgggaattcagagtacgc
ccaacttggaaccttccagggtattggatatcaggagaagtgaatttccacaggcgatcg
cagatttgctacgttctttctcaatgtgcggaaagtatgaataaattctcattgtaagtg
gggttgcatgctgaggcctctaccagttacccggacacgcgtttctgggagcaaataagc
gctaaatgctaccaacgggtatgaaaagcagcatttacttcttttccttccacaagcaaa
aagtatttagagaaaccgaaaagtcatacctaatcgctaaaattttgcactttttggcta
cttcactaacgaattcgaggtgaagggtctattgtaaaaaaaaaaaaaacaacaaacaaa
caaaaacaaaaaaaaaaaacgctcggtcaccagcgcggcgcgggaatgcatccgcagcgc
caagcttggcgttcgcgctcccttccccgcgagctccgggacacgggcagcccatttagc
cgccgccgagcgccaggcagcccgctccgcccagccgcgcagagagctgaagcatccgcc
gCTGCACGAATCTCCGGAG
Primer
(+)TGCTATCTTCTCCACGCTGA
(+)CTCCGGAGATTCGTGCAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.