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Mouse element [ mm315 ]


Position: chr1:92,185,511-92,186,963 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cxcr7 - Cops8

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCAGCCACATAGCAGTGTCTTcctggaactgccatgcaatgctctgctcggaagcttctt
tgtccccagagacacaggcacagtgccacatgcacacaagaggaaagggggatcctagca
tcatgctgggttccagtgggtgtgtggggcttgtctgcttgggcagaggccctggcatgg
agatgtcctcaccacaaagtgagtcacaggggtggtggctggagctgagagtcagagcag
agtgcaggacggagtcaggccagggtcaagtcagggttagctggccaggagtctgtggaa
gaagtgggtgtcaggcagaaagcacagaggtacagatagaaaattctggaaaagagtcac
cgagtcaagcatctggtatctcattaagagcagcaggtacttgcaggcaccactgaaggc
agttgagccctgtgatgatctgcactcagaagggcgtctacaccctcttgactagagtgt
actcctgctgaatcctcagccagcacacctagggcttatgggagagaaaatcgcagcact
tggccattctcagggcatgttgtgggcagagtacacagtctgctcgttatgctgagaatc
tatgcattgaaaacaagtgtctcaaagtcttgggcttctatctactccccttggtttctc
ctccccaggcccctcctcccctttcttatctggccggcccacaccctgagcctgctccct
gaggtcagaggctgtgctgcgtccctaggtccctggaggataagttttgcctttctgccc
atgggggagggcttccacggccatggctgcctctatagatctttgggggaagtggccagg
aaggccctgctgacctgttttgagctcacactcaggtttccgctccctgggtttgtgtag
agtagctggagggccagctataagtaacccacgggctccaacctgctctctcctggtccc
ttcatctgtaaaaacaattgctgttgtcccccacccatctccaggagagttcctgagtgc
gtgggaatcttgggatgtttggggaattgttctggtttccaaggctacatggctggaagg
atggggctgagtggctgtggtgggggtggggtgggaaggacttggaggtgtctctctctc
atgggctgtacttctctctggctggccctcggaggtggtaagcctcaagtggatggagaa
gcttgttgcttttgtaggcagacacttccatgtagaaactcagcatgactctctttagac
tgtgccggtggcaagcaggttagagcctgtgttcctgctactgagccagaaggcatggct
tctggggcaaaggctgtgtctggaaagggggctctgcccctgctcacacatggtgctgag
cacaccctcattgagggagacagtggccgtgagtttggggtaaaaggctcttcTGTTCTC
AAGGAGACGGGTC
Primer
(+)CCAGCCACATAGCAGTGTCTT
(+)GACCCGTCTCCTTGAGAACA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.