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Human element [ hs288 ]


Position: chr6:98,813,608-98,814,940 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR2113 - POU3F2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CttCTGGGCTTGAAACAATGTCAttaatcagattctgataagagttatttcagatttttc
agaacatcagttctcttgtttttgttcctcacataagatctaaaccctttttctacctac
cttgtatccagcaagtaatgattaggaactgttgaaatctttacactatcctaataatgt
gccaattaaagaaggtgttttacccagattacaaagatttgtctgaggtggccaccactt
tgttaaggctgttttgtggacatcttcataattaatggaaaaatcattaggaattcagtc
tttattaacccctatagctgcaggggcccatttcatcttaattgcattcatttggcactg
gcagtattatacagcataatcactaataaatgatcttttaatttgtaccaatcaacggag
cttgctttcatgccaatattcctgtttctttgatgttgacctgtcttgatttttgatcat
ttgggcttaagatgatttactgggaaatcaatatcaataccagaactgcttgtattcata
cgtctgtggttaggttccatttgagtgtattttgattgaaataagtgtgcttgattaccc
attcagatgagggggaaaagcataatcaagttgggaaatctggtactgtattcttactca
aaagaaaataattagaaactgtagggaaactgaagattcaggagagcagtagaggtaaca
cttcagatgccactaattaagcaactttgtccgccatctcctaaaggccttcaccaatag
cgtaatatgctattacccattagcaaggccaatgggggctttggttacacttgttaatgg
gaaaccccgagacagtttctctcattatcccgctgtcagcactgtctctgcagtgtaaag
tggtcgtcattgttctgtgggtcagctaaccagaaaccaagctactgtaaagaaacattc
tgcagctaattgaaaatgactgaaaaatcctcttatcatccagtcacctctctttatttg
tggaacaatgggacgtatatggagttgtggggaaaaaggaaagttcaggctatgacactg
aatttttcctgactaatacaactacaaagaagtctttgaagataattccaggggaaaaat
ccactcactttttttaagagataatgacagtaagacgtaagtgagtgttgaatattgcac
ttgctgttctgaaaagtactttatgtttatgtgattcccttcactagaggaactcaaagc
tttttccatgaaactgctgaaatcctcattatcctaatgagcaaatggcacaaAACTGGA
AAAGCCACAAGGA
Primer
(+)CACCTGGGCTTGAAACAATGTCA
(+)TCCTTGTGGCTTTTCCAGTT


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